Experiment: Phenylacetic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02247 and H281DRAFT_02248 overlap by 4 nucleotides H281DRAFT_02248 and H281DRAFT_02249 are separated by 33 nucleotides H281DRAFT_02249 and H281DRAFT_02250 are separated by 200 nucleotides
H281DRAFT_02247: H281DRAFT_02247 - D-3-phosphoglycerate dehydrogenase, at 395,170 to 396,183
_02247
H281DRAFT_02248: H281DRAFT_02248 - Predicted esterase of the alpha-beta hydrolase superfamily, at 396,180 to 397,043
_02248
H281DRAFT_02249: H281DRAFT_02249 - uncharacterized domain 1-containing protein, at 397,077 to 397,481
_02249
H281DRAFT_02250: H281DRAFT_02250 - tRNA_Lys_CTT, at 397,682 to 397,757
_02250
Position (kb) 396
397
398 Strain fitness (log2 ratio) -2
-1
0
1
2 at 395.262 kb on + strand at 395.433 kb on + strand, within H281DRAFT_02247 at 395.434 kb on - strand, within H281DRAFT_02247 at 395.536 kb on + strand, within H281DRAFT_02247 at 395.536 kb on + strand, within H281DRAFT_02247 at 395.536 kb on + strand, within H281DRAFT_02247 at 395.537 kb on - strand, within H281DRAFT_02247 at 395.537 kb on - strand, within H281DRAFT_02247 at 395.537 kb on - strand, within H281DRAFT_02247 at 395.544 kb on + strand, within H281DRAFT_02247 at 395.759 kb on - strand, within H281DRAFT_02247 at 395.983 kb on + strand, within H281DRAFT_02247 at 395.984 kb on - strand, within H281DRAFT_02247 at 395.984 kb on - strand, within H281DRAFT_02247 at 395.984 kb on - strand, within H281DRAFT_02247 at 396.011 kb on - strand, within H281DRAFT_02247 at 396.011 kb on - strand, within H281DRAFT_02247 at 396.058 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.077 kb on - strand, within H281DRAFT_02247 at 396.077 kb on - strand, within H281DRAFT_02247 at 396.085 kb on + strand at 396.085 kb on + strand at 396.086 kb on - strand at 396.181 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.251 kb on - strand at 396.251 kb on - strand at 396.251 kb on - strand at 396.280 kb on + strand, within H281DRAFT_02248 at 396.281 kb on - strand, within H281DRAFT_02248 at 396.322 kb on + strand, within H281DRAFT_02248 at 396.322 kb on + strand, within H281DRAFT_02248 at 396.323 kb on - strand, within H281DRAFT_02248 at 396.374 kb on - strand, within H281DRAFT_02248 at 396.396 kb on + strand, within H281DRAFT_02248 at 396.396 kb on + strand, within H281DRAFT_02248 at 396.397 kb on - strand, within H281DRAFT_02248 at 396.397 kb on - strand, within H281DRAFT_02248 at 396.397 kb on - strand, within H281DRAFT_02248 at 396.397 kb on - strand, within H281DRAFT_02248 at 396.605 kb on + strand, within H281DRAFT_02248 at 396.605 kb on + strand, within H281DRAFT_02248 at 396.605 kb on + strand, within H281DRAFT_02248 at 396.606 kb on - strand, within H281DRAFT_02248 at 396.606 kb on - strand, within H281DRAFT_02248 at 396.606 kb on - strand, within H281DRAFT_02248 at 396.643 kb on + strand, within H281DRAFT_02248 at 396.643 kb on + strand, within H281DRAFT_02248 at 396.643 kb on + strand, within H281DRAFT_02248 at 396.644 kb on - strand, within H281DRAFT_02248 at 396.644 kb on - strand, within H281DRAFT_02248 at 396.754 kb on + strand, within H281DRAFT_02248 at 396.754 kb on + strand, within H281DRAFT_02248 at 396.754 kb on + strand, within H281DRAFT_02248 at 396.754 kb on + strand, within H281DRAFT_02248 at 396.755 kb on - strand, within H281DRAFT_02248 at 396.755 kb on - strand, within H281DRAFT_02248 at 396.755 kb on - strand, within H281DRAFT_02248 at 396.778 kb on + strand, within H281DRAFT_02248 at 396.779 kb on - strand, within H281DRAFT_02248 at 396.779 kb on - strand, within H281DRAFT_02248 at 396.779 kb on - strand, within H281DRAFT_02248 at 396.829 kb on + strand, within H281DRAFT_02248 at 396.830 kb on - strand, within H281DRAFT_02248 at 396.830 kb on - strand, within H281DRAFT_02248 at 396.852 kb on + strand, within H281DRAFT_02248 at 396.865 kb on + strand, within H281DRAFT_02248 at 396.865 kb on + strand, within H281DRAFT_02248 at 396.866 kb on - strand, within H281DRAFT_02248 at 396.866 kb on - strand, within H281DRAFT_02248 at 396.898 kb on + strand, within H281DRAFT_02248 at 396.899 kb on - strand, within H281DRAFT_02248 at 397.057 kb on - strand at 397.057 kb on - strand at 397.079 kb on - strand at 397.094 kb on - strand at 397.094 kb on - strand at 397.094 kb on - strand at 397.094 kb on - strand at 397.213 kb on - strand, within H281DRAFT_02249 at 397.613 kb on + strand at 397.614 kb on - strand at 397.773 kb on + strand at 397.773 kb on + strand at 397.818 kb on + strand at 397.818 kb on + strand at 397.818 kb on + strand at 397.818 kb on + strand at 397.819 kb on - strand at 397.819 kb on - strand at 397.819 kb on - strand at 397.819 kb on - strand at 397.830 kb on - strand at 397.830 kb on - strand at 397.838 kb on + strand at 397.838 kb on + strand at 397.839 kb on - strand at 397.839 kb on - strand at 397.839 kb on - strand at 397.858 kb on + strand at 397.858 kb on + strand at 397.858 kb on + strand at 397.859 kb on - strand at 397.859 kb on - strand at 397.859 kb on - strand at 397.867 kb on - strand at 397.999 kb on - strand at 398.001 kb on + strand at 398.001 kb on + strand at 398.001 kb on + strand at 398.001 kb on + strand at 398.001 kb on + strand at 398.002 kb on - strand at 398.002 kb on - strand at 398.002 kb on - strand at 398.002 kb on - strand at 398.002 kb on - strand at 398.002 kb on - strand at 398.002 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic (C) remove 395,262 + +0.4 395,433 + H281DRAFT_02247 0.26 +1.2 395,434 - H281DRAFT_02247 0.26 -0.1 395,536 + H281DRAFT_02247 0.36 +0.2 395,536 + H281DRAFT_02247 0.36 +0.3 395,536 + H281DRAFT_02247 0.36 +0.5 395,537 - H281DRAFT_02247 0.36 -0.1 395,537 - H281DRAFT_02247 0.36 +0.2 395,537 - H281DRAFT_02247 0.36 +0.3 395,544 + H281DRAFT_02247 0.37 +0.0 395,759 - H281DRAFT_02247 0.58 +0.3 395,983 + H281DRAFT_02247 0.80 +0.2 395,984 - H281DRAFT_02247 0.80 +1.0 395,984 - H281DRAFT_02247 0.80 +0.6 395,984 - H281DRAFT_02247 0.80 +0.6 396,011 - H281DRAFT_02247 0.83 -1.9 396,011 - H281DRAFT_02247 0.83 +0.5 396,058 + H281DRAFT_02247 0.88 +1.0 396,076 + H281DRAFT_02247 0.89 +0.2 396,076 + H281DRAFT_02247 0.89 +1.3 396,076 + H281DRAFT_02247 0.89 +1.0 396,076 + H281DRAFT_02247 0.89 +0.2 396,076 + H281DRAFT_02247 0.89 -0.5 396,076 + H281DRAFT_02247 0.89 +1.0 396,077 - H281DRAFT_02247 0.89 +1.7 396,077 - H281DRAFT_02247 0.89 +0.4 396,085 + +0.5 396,085 + +0.7 396,086 - +0.8 396,181 + +0.7 396,250 + +0.3 396,250 + +1.0 396,250 + +0.3 396,250 + -0.4 396,250 + -0.1 396,250 + -0.1 396,250 + +0.6 396,250 + -0.3 396,251 - -0.0 396,251 - -1.1 396,251 - -0.6 396,280 + H281DRAFT_02248 0.12 -0.5 396,281 - H281DRAFT_02248 0.12 +0.0 396,322 + H281DRAFT_02248 0.16 +0.2 396,322 + H281DRAFT_02248 0.16 +0.0 396,323 - H281DRAFT_02248 0.17 +0.6 396,374 - H281DRAFT_02248 0.22 -2.0 396,396 + H281DRAFT_02248 0.25 +0.1 396,396 + H281DRAFT_02248 0.25 +0.3 396,397 - H281DRAFT_02248 0.25 +0.7 396,397 - H281DRAFT_02248 0.25 -0.5 396,397 - H281DRAFT_02248 0.25 +0.6 396,397 - H281DRAFT_02248 0.25 +0.1 396,605 + H281DRAFT_02248 0.49 -0.1 396,605 + H281DRAFT_02248 0.49 -0.3 396,605 + H281DRAFT_02248 0.49 -0.2 396,606 - H281DRAFT_02248 0.49 +0.3 396,606 - H281DRAFT_02248 0.49 -1.3 396,606 - H281DRAFT_02248 0.49 +0.6 396,643 + H281DRAFT_02248 0.54 +0.7 396,643 + H281DRAFT_02248 0.54 +0.7 396,643 + H281DRAFT_02248 0.54 -0.3 396,644 - H281DRAFT_02248 0.54 -0.5 396,644 - H281DRAFT_02248 0.54 -0.6 396,754 + H281DRAFT_02248 0.66 +0.1 396,754 + H281DRAFT_02248 0.66 +0.0 396,754 + H281DRAFT_02248 0.66 +0.0 396,754 + H281DRAFT_02248 0.66 +0.8 396,755 - H281DRAFT_02248 0.67 +0.1 396,755 - H281DRAFT_02248 0.67 -0.5 396,755 - H281DRAFT_02248 0.67 +0.4 396,778 + H281DRAFT_02248 0.69 +0.2 396,779 - H281DRAFT_02248 0.69 -1.0 396,779 - H281DRAFT_02248 0.69 -0.2 396,779 - H281DRAFT_02248 0.69 +1.4 396,829 + H281DRAFT_02248 0.75 -0.2 396,830 - H281DRAFT_02248 0.75 +0.2 396,830 - H281DRAFT_02248 0.75 -0.2 396,852 + H281DRAFT_02248 0.78 +0.2 396,865 + H281DRAFT_02248 0.79 +0.6 396,865 + H281DRAFT_02248 0.79 -0.1 396,866 - H281DRAFT_02248 0.79 -1.2 396,866 - H281DRAFT_02248 0.79 -0.8 396,898 + H281DRAFT_02248 0.83 +0.4 396,899 - H281DRAFT_02248 0.83 +0.5 397,057 - -0.6 397,057 - -1.0 397,079 - -1.0 397,094 - +0.7 397,094 - +0.9 397,094 - -0.0 397,094 - -0.8 397,213 - H281DRAFT_02249 0.34 +1.9 397,613 + -0.3 397,614 - -1.5 397,773 + -0.2 397,773 + -0.4 397,818 + -0.3 397,818 + +0.3 397,818 + +0.0 397,818 + -0.0 397,819 - +0.5 397,819 - +0.1 397,819 - +1.2 397,819 - -0.1 397,830 - +0.7 397,830 - -0.1 397,838 + +0.2 397,838 + +0.1 397,839 - +0.7 397,839 - -0.1 397,839 - -1.0 397,858 + +0.5 397,858 + -0.0 397,858 + -0.2 397,859 - +1.0 397,859 - +1.0 397,859 - +0.2 397,867 - +0.4 397,999 - +0.3 398,001 + +0.3 398,001 + -0.5 398,001 + +1.8 398,001 + +0.2 398,001 + -0.4 398,002 - +0.5 398,002 - +0.0 398,002 - -0.1 398,002 - +0.3 398,002 - -0.4 398,002 - +0.3 398,002 - -0.0
Or see this region's nucleotide sequence