Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3417 and Dsui_3418 overlap by 8 nucleotides Dsui_3418 and Dsui_3419 are separated by 109 nucleotides Dsui_3419 and Dsui_3421 are separated by 385 nucleotides
Dsui_3417: Dsui_3417 - hypothetical protein, at 3,669,933 to 3,670,328
_3417
Dsui_3418: Dsui_3418 - putative permease, at 3,670,321 to 3,671,055
_3418
Dsui_3419: Dsui_3419 - transcriptional regulator, at 3,671,165 to 3,672,064
_3419
Dsui_3421: Dsui_3421 - putative glycerate kinase, at 3,672,450 to 3,673,769
_3421
Position (kb)
3671
3672
3673 Strain fitness (log2 ratio)
-2
-1
0
1 at 3670.254 kb on + strand at 3670.272 kb on - strand at 3670.311 kb on - strand at 3670.418 kb on - strand at 3670.494 kb on + strand at 3670.685 kb on - strand, within Dsui_3418 at 3670.770 kb on + strand at 3670.824 kb on + strand at 3670.845 kb on + strand, within Dsui_3418 at 3670.853 kb on - strand at 3670.880 kb on - strand at 3670.913 kb on + strand at 3670.939 kb on - strand at 3670.972 kb on + strand, within Dsui_3418 at 3671.163 kb on - strand at 3671.240 kb on - strand at 3671.377 kb on + strand at 3671.388 kb on + strand, within Dsui_3419 at 3671.476 kb on - strand, within Dsui_3419 at 3671.480 kb on - strand at 3671.736 kb on + strand, within Dsui_3419 at 3671.756 kb on - strand at 3671.756 kb on - strand, within Dsui_3419 at 3671.756 kb on - strand, within Dsui_3419 at 3671.922 kb on + strand at 3671.942 kb on + strand, within Dsui_3419 at 3672.010 kb on - strand at 3672.099 kb on + strand at 3672.108 kb on - strand at 3672.120 kb on + strand at 3672.129 kb on + strand at 3672.188 kb on + strand at 3672.191 kb on - strand at 3672.191 kb on - strand at 3672.250 kb on - strand at 3672.393 kb on - strand at 3672.504 kb on + strand at 3672.719 kb on + strand at 3672.759 kb on + strand at 3672.858 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 3,670,254 + +0.7 3,670,272 - +0.7 3,670,311 - -0.8 3,670,418 - +0.7 3,670,494 + -0.3 3,670,685 - Dsui_3418 0.50 -1.3 3,670,770 + -1.8 3,670,824 + +0.7 3,670,845 + Dsui_3418 0.71 -1.8 3,670,853 - -1.3 3,670,880 - +0.7 3,670,913 + -0.3 3,670,939 - -0.3 3,670,972 + Dsui_3418 0.89 -1.3 3,671,163 - +0.7 3,671,240 - -0.3 3,671,377 + +0.7 3,671,388 + Dsui_3419 0.25 +0.7 3,671,476 - Dsui_3419 0.35 -1.9 3,671,480 - -0.3 3,671,736 + Dsui_3419 0.63 -2.1 3,671,756 - -0.3 3,671,756 - Dsui_3419 0.66 -0.8 3,671,756 - Dsui_3419 0.66 -2.3 3,671,922 + +0.7 3,671,942 + Dsui_3419 0.86 -1.3 3,672,010 - +0.7 3,672,099 + +0.7 3,672,108 - +0.7 3,672,120 + +0.7 3,672,129 + -0.3 3,672,188 + -0.8 3,672,191 - -0.3 3,672,191 - -0.8 3,672,250 - -0.3 3,672,393 - -0.8 3,672,504 + +0.7 3,672,719 + -1.6 3,672,759 + +0.7 3,672,858 + +0.7
Or see this region's nucleotide sequence