Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3089 and Dsui_3090 are separated by 286 nucleotides Dsui_3090 and Dsui_3091 are separated by 9 nucleotides Dsui_3091 and Dsui_3092 are separated by 122 nucleotides
Dsui_3089: Dsui_3089 - UDP-2,3-diacylglucosamine hydrolase, at 3,307,447 to 3,308,205
_3089
Dsui_3090: Dsui_3090 - hypothetical protein, at 3,308,492 to 3,308,770
_3090
Dsui_3091: Dsui_3091 - integral membrane protein, TerC family, at 3,308,780 to 3,309,745
_3091
Dsui_3092: Dsui_3092 - ATP-dependent DNA helicase RecQ, at 3,309,868 to 3,311,706
_3092
Position (kb)
3308
3309
3310 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3308.233 kb on + strand at 3308.247 kb on + strand at 3308.249 kb on - strand at 3308.297 kb on + strand at 3308.459 kb on + strand at 3308.467 kb on - strand at 3308.587 kb on + strand, within Dsui_3090 at 3308.620 kb on + strand, within Dsui_3090 at 3308.628 kb on - strand at 3308.662 kb on - strand at 3308.854 kb on - strand at 3308.857 kb on - strand at 3308.866 kb on + strand at 3308.903 kb on + strand, within Dsui_3091 at 3308.903 kb on + strand, within Dsui_3091 at 3308.911 kb on - strand at 3308.925 kb on + strand, within Dsui_3091 at 3308.931 kb on + strand, within Dsui_3091 at 3309.061 kb on + strand, within Dsui_3091 at 3309.115 kb on + strand, within Dsui_3091 at 3309.147 kb on + strand, within Dsui_3091 at 3309.212 kb on - strand at 3309.235 kb on + strand, within Dsui_3091 at 3309.489 kb on - strand at 3309.538 kb on - strand, within Dsui_3091 at 3309.592 kb on - strand, within Dsui_3091 at 3309.612 kb on + strand, within Dsui_3091 at 3309.823 kb on + strand at 3310.041 kb on + strand at 3310.130 kb on - strand, within Dsui_3092 at 3310.162 kb on + strand, within Dsui_3092 at 3310.504 kb on + strand, within Dsui_3092 at 3310.535 kb on - strand, within Dsui_3092 at 3310.542 kb on - strand, within Dsui_3092 at 3310.574 kb on - strand, within Dsui_3092 at 3310.702 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 3,308,233 + +0.8 3,308,247 + -1.8 3,308,249 - -0.8 3,308,297 + -0.0 3,308,459 + -0.2 3,308,467 - -1.2 3,308,587 + Dsui_3090 0.34 +0.2 3,308,620 + Dsui_3090 0.46 -0.1 3,308,628 - -0.2 3,308,662 - -0.2 3,308,854 - -0.8 3,308,857 - -1.8 3,308,866 + +0.8 3,308,903 + Dsui_3091 0.13 +1.2 3,308,903 + Dsui_3091 0.13 -0.8 3,308,911 - +0.8 3,308,925 + Dsui_3091 0.15 +0.8 3,308,931 + Dsui_3091 0.16 +0.3 3,309,061 + Dsui_3091 0.29 +0.4 3,309,115 + Dsui_3091 0.35 -0.1 3,309,147 + Dsui_3091 0.38 +1.8 3,309,212 - -0.2 3,309,235 + Dsui_3091 0.47 -0.7 3,309,489 - +0.8 3,309,538 - Dsui_3091 0.78 +0.1 3,309,592 - Dsui_3091 0.84 +0.8 3,309,612 + Dsui_3091 0.86 +0.8 3,309,823 + +1.8 3,310,041 + +0.8 3,310,130 - Dsui_3092 0.14 +0.8 3,310,162 + Dsui_3092 0.16 +0.3 3,310,504 + Dsui_3092 0.35 +0.3 3,310,535 - Dsui_3092 0.36 -0.8 3,310,542 - Dsui_3092 0.37 -0.2 3,310,574 - Dsui_3092 0.38 -0.2 3,310,702 - -0.8
Or see this region's nucleotide sequence