Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2521 and Dsui_2522 are separated by 85 nucleotides Dsui_2522 and Dsui_2523 are separated by 142 nucleotides Dsui_2523 and Dsui_2524 are separated by 49 nucleotides
Dsui_2521: Dsui_2521 - cysteine synthase A, at 2,672,738 to 2,673,724
_2521
Dsui_2522: Dsui_2522 - hypothetical protein, at 2,673,810 to 2,673,932
_2522
Dsui_2523: Dsui_2523 - hypothetical protein, at 2,674,075 to 2,674,617
_2523
Dsui_2524: Dsui_2524 - putative conserved small protein, at 2,674,667 to 2,675,002
_2524
Position (kb)
2673
2674 Strain fitness (log2 ratio)
-2
-1
0
1 at 2672.825 kb on + strand at 2672.889 kb on - strand, within Dsui_2521 at 2672.902 kb on + strand, within Dsui_2521 at 2672.902 kb on + strand, within Dsui_2521 at 2672.988 kb on + strand, within Dsui_2521 at 2673.010 kb on - strand, within Dsui_2521 at 2673.033 kb on - strand, within Dsui_2521 at 2673.086 kb on - strand, within Dsui_2521 at 2673.102 kb on - strand, within Dsui_2521 at 2673.123 kb on - strand, within Dsui_2521 at 2673.165 kb on + strand, within Dsui_2521 at 2673.166 kb on + strand, within Dsui_2521 at 2673.209 kb on - strand, within Dsui_2521 at 2673.260 kb on + strand, within Dsui_2521 at 2673.268 kb on - strand, within Dsui_2521 at 2673.268 kb on - strand, within Dsui_2521 at 2673.375 kb on + strand, within Dsui_2521 at 2673.431 kb on + strand at 2673.444 kb on - strand, within Dsui_2521 at 2673.473 kb on - strand, within Dsui_2521 at 2673.489 kb on + strand, within Dsui_2521 at 2673.499 kb on + strand, within Dsui_2521 at 2673.675 kb on + strand at 2673.675 kb on + strand at 2673.683 kb on - strand at 2673.718 kb on + strand at 2673.718 kb on + strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.726 kb on - strand at 2673.739 kb on + strand at 2673.749 kb on + strand at 2673.749 kb on + strand at 2673.749 kb on + strand at 2673.749 kb on + strand at 2673.757 kb on - strand at 2673.757 kb on - strand at 2673.757 kb on - strand at 2673.757 kb on - strand at 2673.757 kb on - strand at 2673.830 kb on - strand, within Dsui_2522 at 2673.850 kb on + strand, within Dsui_2522 at 2673.850 kb on + strand, within Dsui_2522 at 2673.911 kb on - strand, within Dsui_2522 at 2673.960 kb on + strand at 2673.986 kb on + strand at 2674.132 kb on + strand, within Dsui_2523 at 2674.146 kb on + strand, within Dsui_2523 at 2674.146 kb on + strand, within Dsui_2523 at 2674.183 kb on + strand, within Dsui_2523 at 2674.272 kb on + strand, within Dsui_2523 at 2674.353 kb on + strand, within Dsui_2523 at 2674.366 kb on - strand, within Dsui_2523 at 2674.373 kb on + strand, within Dsui_2523 at 2674.404 kb on - strand, within Dsui_2523 at 2674.503 kb on + strand, within Dsui_2523
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 2,672,825 + -1.3 2,672,889 - Dsui_2521 0.15 -1.1 2,672,902 + Dsui_2521 0.17 +0.7 2,672,902 + Dsui_2521 0.17 +0.7 2,672,988 + Dsui_2521 0.25 -0.3 2,673,010 - Dsui_2521 0.28 -2.6 2,673,033 - Dsui_2521 0.30 -1.1 2,673,086 - Dsui_2521 0.35 -0.3 2,673,102 - Dsui_2521 0.37 -0.0 2,673,123 - Dsui_2521 0.39 -0.3 2,673,165 + Dsui_2521 0.43 -1.6 2,673,166 + Dsui_2521 0.43 -1.3 2,673,209 - Dsui_2521 0.48 -1.6 2,673,260 + Dsui_2521 0.53 -0.9 2,673,268 - Dsui_2521 0.54 -0.2 2,673,268 - Dsui_2521 0.54 +0.4 2,673,375 + Dsui_2521 0.65 +0.7 2,673,431 + +0.7 2,673,444 - Dsui_2521 0.72 -0.4 2,673,473 - Dsui_2521 0.74 -0.7 2,673,489 + Dsui_2521 0.76 +0.7 2,673,499 + Dsui_2521 0.77 -0.3 2,673,675 + -1.3 2,673,675 + +0.7 2,673,683 - -0.3 2,673,718 + -0.3 2,673,718 + +0.7 2,673,726 - -0.5 2,673,726 - -0.4 2,673,726 - +0.1 2,673,726 - -0.6 2,673,726 - -0.3 2,673,726 - -0.2 2,673,726 - -0.3 2,673,739 + -0.9 2,673,749 + -0.3 2,673,749 + +0.7 2,673,749 + -1.6 2,673,749 + +0.7 2,673,757 - -0.4 2,673,757 - -0.2 2,673,757 - -0.2 2,673,757 - -0.3 2,673,757 - +0.0 2,673,830 - Dsui_2522 0.16 -0.3 2,673,850 + Dsui_2522 0.33 -0.3 2,673,850 + Dsui_2522 0.33 -0.3 2,673,911 - Dsui_2522 0.82 -0.3 2,673,960 + +0.7 2,673,986 + +0.7 2,674,132 + Dsui_2523 0.10 -2.1 2,674,146 + Dsui_2523 0.13 -1.3 2,674,146 + Dsui_2523 0.13 +0.7 2,674,183 + Dsui_2523 0.20 -0.9 2,674,272 + Dsui_2523 0.36 -0.9 2,674,353 + Dsui_2523 0.51 +0.7 2,674,366 - Dsui_2523 0.54 -0.2 2,674,373 + Dsui_2523 0.55 +0.7 2,674,404 - Dsui_2523 0.61 -0.4 2,674,503 + Dsui_2523 0.79 -0.9
Or see this region's nucleotide sequence