Strain Fitness in Dechlorosoma suillum PS around Dsui_1953

Experiment: D-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1951 and Dsui_1952 are separated by 13 nucleotidesDsui_1952 and Dsui_1953 are separated by 9 nucleotidesDsui_1953 and Dsui_1954 are separated by 3 nucleotidesDsui_1954 and Dsui_1955 are separated by 5 nucleotides Dsui_1951: Dsui_1951 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 2,063,377 to 2,063,925 _1951 Dsui_1952: Dsui_1952 - D-heptose-7- phosphate 1-kinase, at 2,063,939 to 2,064,886 _1952 Dsui_1953: Dsui_1953 - ADP-L-glycero-D-manno-heptose-6-epimerase, at 2,064,896 to 2,065,888 _1953 Dsui_1954: Dsui_1954 - cysteine synthase B, at 2,065,892 to 2,066,791 _1954 Dsui_1955: Dsui_1955 - 3'-5' exonuclease, at 2,066,797 to 2,067,594 _1955 Position (kb) 2064 2065 2066Strain fitness (log2 ratio) -1 0 1at 2066.794 kb on - strandat 2066.831 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Lactate (C)
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2,066,794 - -0.4
2,066,831 + -0.6

Or see this region's nucleotide sequence