Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1434 and Dsui_1435 overlap by 1 nucleotides Dsui_1435 and Dsui_1436 are separated by 12 nucleotides Dsui_1436 and Dsui_1437 are separated by 18 nucleotides
Dsui_1434: Dsui_1434 - methylase of chemotaxis methyl-accepting protein, at 1,487,835 to 1,488,647
_1434
Dsui_1435: Dsui_1435 - chemotaxis signal transduction protein, at 1,488,647 to 1,489,204
_1435
Dsui_1436: Dsui_1436 - methyl-accepting chemotaxis protein, at 1,489,217 to 1,490,839
_1436
Dsui_1437: Dsui_1437 - chemotaxis protein histidine kinase-like protein, at 1,490,858 to 1,493,092
_1437
Position (kb)
1489
1490
1491 Strain fitness (log2 ratio)
-2
-1
0
1 at 1488.286 kb on + strand, within Dsui_1434 at 1488.286 kb on + strand, within Dsui_1434 at 1488.673 kb on - strand at 1488.724 kb on + strand, within Dsui_1435 at 1488.863 kb on + strand, within Dsui_1435 at 1488.863 kb on + strand, within Dsui_1435 at 1488.871 kb on - strand, within Dsui_1435 at 1488.909 kb on + strand, within Dsui_1435 at 1489.127 kb on + strand, within Dsui_1435 at 1489.205 kb on + strand at 1489.317 kb on + strand at 1489.441 kb on + strand, within Dsui_1436 at 1489.481 kb on - strand, within Dsui_1436 at 1489.509 kb on - strand, within Dsui_1436 at 1489.509 kb on - strand, within Dsui_1436 at 1489.658 kb on - strand, within Dsui_1436 at 1489.917 kb on + strand, within Dsui_1436 at 1489.924 kb on + strand, within Dsui_1436 at 1489.924 kb on + strand, within Dsui_1436 at 1489.953 kb on + strand, within Dsui_1436 at 1490.027 kb on - strand, within Dsui_1436 at 1490.067 kb on + strand, within Dsui_1436 at 1490.193 kb on - strand, within Dsui_1436 at 1490.366 kb on - strand, within Dsui_1436 at 1490.513 kb on - strand, within Dsui_1436 at 1490.520 kb on + strand, within Dsui_1436 at 1490.686 kb on - strand at 1490.687 kb on - strand at 1490.687 kb on - strand at 1490.922 kb on - strand at 1490.973 kb on + strand at 1491.012 kb on + strand at 1491.053 kb on - strand at 1491.306 kb on - strand, within Dsui_1437 at 1491.397 kb on + strand, within Dsui_1437 at 1491.402 kb on - strand, within Dsui_1437 at 1491.446 kb on + strand, within Dsui_1437 at 1491.454 kb on + strand, within Dsui_1437 at 1491.533 kb on - strand, within Dsui_1437 at 1491.536 kb on + strand, within Dsui_1437 at 1491.557 kb on - strand, within Dsui_1437 at 1491.561 kb on + strand, within Dsui_1437 at 1491.708 kb on - strand, within Dsui_1437
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 1,488,286 + Dsui_1434 0.55 +0.7 1,488,286 + Dsui_1434 0.55 -1.3 1,488,673 - -0.4 1,488,724 + Dsui_1435 0.14 -0.9 1,488,863 + Dsui_1435 0.39 -0.9 1,488,863 + Dsui_1435 0.39 -1.3 1,488,871 - Dsui_1435 0.40 -0.3 1,488,909 + Dsui_1435 0.47 -0.3 1,489,127 + Dsui_1435 0.86 +0.7 1,489,205 + -1.3 1,489,317 + -1.3 1,489,441 + Dsui_1436 0.14 -0.9 1,489,481 - Dsui_1436 0.16 -0.1 1,489,509 - Dsui_1436 0.18 -0.1 1,489,509 - Dsui_1436 0.18 +0.6 1,489,658 - Dsui_1436 0.27 -0.3 1,489,917 + Dsui_1436 0.43 +0.7 1,489,924 + Dsui_1436 0.44 +0.7 1,489,924 + Dsui_1436 0.44 +0.1 1,489,953 + Dsui_1436 0.45 +1.0 1,490,027 - Dsui_1436 0.50 -0.1 1,490,067 + Dsui_1436 0.52 -1.6 1,490,193 - Dsui_1436 0.60 -0.1 1,490,366 - Dsui_1436 0.71 +0.3 1,490,513 - Dsui_1436 0.80 +0.3 1,490,520 + Dsui_1436 0.80 +0.7 1,490,686 - +0.0 1,490,687 - -0.2 1,490,687 - -0.2 1,490,922 - -0.2 1,490,973 + -1.3 1,491,012 + -2.1 1,491,053 - -0.1 1,491,306 - Dsui_1437 0.20 -0.2 1,491,397 + Dsui_1437 0.24 -1.3 1,491,402 - Dsui_1437 0.24 -0.2 1,491,446 + Dsui_1437 0.26 -0.9 1,491,454 + Dsui_1437 0.27 -1.6 1,491,533 - Dsui_1437 0.30 -0.3 1,491,536 + Dsui_1437 0.30 -1.6 1,491,557 - Dsui_1437 0.31 -0.1 1,491,561 + Dsui_1437 0.31 -1.6 1,491,708 - Dsui_1437 0.38 -0.2
Or see this region's nucleotide sequence