Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1191 and Dsui_1192 are separated by 132 nucleotides Dsui_1192 and Dsui_1193 are separated by 175 nucleotides Dsui_1193 and Dsui_1194 are separated by 48 nucleotides
Dsui_1191: Dsui_1191 - type IV pilus secretin PilQ/competence protein, at 1,243,206 to 1,245,380
_1191
Dsui_1192: Dsui_1192 - tRNA-Met, at 1,245,513 to 1,245,589
_1192
Dsui_1193: Dsui_1193 - hypothetical protein, at 1,245,765 to 1,246,151
_1193
Dsui_1194: Dsui_1194 - tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB, at 1,246,200 to 1,247,540
_1194
Position (kb)
1245
1246
1247 Strain fitness (log2 ratio)
-2
-1
0
1 at 1244.776 kb on - strand, within Dsui_1191 at 1244.785 kb on + strand, within Dsui_1191 at 1244.815 kb on - strand, within Dsui_1191 at 1244.822 kb on + strand, within Dsui_1191 at 1244.822 kb on + strand, within Dsui_1191 at 1244.822 kb on + strand, within Dsui_1191 at 1244.849 kb on - strand, within Dsui_1191 at 1244.875 kb on + strand, within Dsui_1191 at 1244.875 kb on + strand, within Dsui_1191 at 1244.875 kb on + strand, within Dsui_1191 at 1244.883 kb on - strand, within Dsui_1191 at 1244.927 kb on - strand, within Dsui_1191 at 1244.949 kb on - strand, within Dsui_1191 at 1244.957 kb on + strand, within Dsui_1191 at 1244.957 kb on + strand, within Dsui_1191 at 1244.959 kb on - strand, within Dsui_1191 at 1244.965 kb on - strand, within Dsui_1191 at 1244.965 kb on - strand, within Dsui_1191 at 1244.970 kb on - strand, within Dsui_1191 at 1245.067 kb on - strand, within Dsui_1191 at 1245.099 kb on - strand, within Dsui_1191 at 1245.154 kb on + strand, within Dsui_1191 at 1245.164 kb on + strand at 1245.164 kb on + strand at 1245.172 kb on - strand at 1245.172 kb on - strand at 1245.172 kb on - strand at 1245.247 kb on + strand at 1245.255 kb on - strand at 1245.255 kb on - strand at 1245.272 kb on + strand at 1245.272 kb on + strand at 1245.272 kb on + strand at 1245.280 kb on - strand at 1245.280 kb on - strand at 1245.299 kb on + strand at 1245.309 kb on + strand at 1245.309 kb on + strand at 1245.309 kb on + strand at 1245.317 kb on - strand at 1245.317 kb on - strand at 1245.317 kb on - strand at 1245.319 kb on + strand at 1245.319 kb on + strand at 1245.319 kb on + strand at 1245.327 kb on - strand at 1245.327 kb on - strand at 1245.327 kb on - strand at 1245.327 kb on - strand at 1245.327 kb on - strand at 1245.382 kb on - strand at 1245.393 kb on + strand at 1245.408 kb on - strand at 1245.413 kb on + strand at 1245.421 kb on - strand at 1245.449 kb on + strand at 1245.449 kb on + strand at 1245.452 kb on - strand at 1245.452 kb on - strand at 1245.457 kb on - strand at 1245.662 kb on - strand at 1245.704 kb on - strand at 1245.720 kb on - strand at 1245.731 kb on + strand at 1245.859 kb on - strand, within Dsui_1193 at 1245.866 kb on - strand, within Dsui_1193 at 1245.915 kb on - strand, within Dsui_1193 at 1245.967 kb on + strand, within Dsui_1193 at 1245.976 kb on + strand, within Dsui_1193 at 1245.981 kb on - strand, within Dsui_1193 at 1246.000 kb on - strand, within Dsui_1193 at 1246.058 kb on + strand, within Dsui_1193 at 1246.120 kb on + strand at 1246.132 kb on + strand at 1246.145 kb on - strand at 1246.149 kb on - strand at 1246.156 kb on + strand at 1246.164 kb on - strand at 1246.164 kb on - strand at 1246.182 kb on + strand at 1246.182 kb on + strand at 1246.182 kb on + strand at 1246.182 kb on + strand at 1246.182 kb on + strand at 1246.190 kb on - strand at 1246.190 kb on - strand at 1246.192 kb on + strand at 1246.198 kb on - strand at 1246.217 kb on + strand at 1246.219 kb on - strand at 1246.252 kb on + strand at 1246.270 kb on - strand at 1246.280 kb on - strand at 1246.283 kb on + strand at 1246.283 kb on + strand at 1246.283 kb on + strand at 1246.291 kb on - strand at 1246.317 kb on - strand at 1246.348 kb on - strand, within Dsui_1194 at 1246.367 kb on + strand, within Dsui_1194 at 1246.367 kb on + strand, within Dsui_1194 at 1246.616 kb on + strand, within Dsui_1194 at 1246.624 kb on - strand at 1246.628 kb on + strand, within Dsui_1194 at 1246.636 kb on - strand, within Dsui_1194 at 1246.782 kb on - strand, within Dsui_1194 at 1246.899 kb on + strand, within Dsui_1194 at 1246.909 kb on + strand, within Dsui_1194 at 1246.917 kb on - strand, within Dsui_1194 at 1246.917 kb on - strand, within Dsui_1194 at 1246.951 kb on + strand, within Dsui_1194 at 1246.980 kb on - strand, within Dsui_1194 at 1246.986 kb on - strand, within Dsui_1194 at 1246.992 kb on + strand, within Dsui_1194 at 1246.997 kb on + strand, within Dsui_1194 at 1247.002 kb on + strand, within Dsui_1194 at 1247.072 kb on + strand, within Dsui_1194 at 1247.104 kb on + strand, within Dsui_1194
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 1,244,776 - Dsui_1191 0.72 -1.3 1,244,785 + Dsui_1191 0.73 -0.2 1,244,815 - Dsui_1191 0.74 -0.3 1,244,822 + Dsui_1191 0.74 -0.1 1,244,822 + Dsui_1191 0.74 -0.1 1,244,822 + Dsui_1191 0.74 -0.4 1,244,849 - Dsui_1191 0.76 +0.7 1,244,875 + Dsui_1191 0.77 -0.4 1,244,875 + Dsui_1191 0.77 -0.3 1,244,875 + Dsui_1191 0.77 -0.2 1,244,883 - Dsui_1191 0.77 +0.7 1,244,927 - Dsui_1191 0.79 -0.1 1,244,949 - Dsui_1191 0.80 +1.7 1,244,957 + Dsui_1191 0.81 -0.0 1,244,957 + Dsui_1191 0.81 -0.4 1,244,959 - Dsui_1191 0.81 -0.3 1,244,965 - Dsui_1191 0.81 +0.7 1,244,965 - Dsui_1191 0.81 -0.6 1,244,970 - Dsui_1191 0.81 -0.9 1,245,067 - Dsui_1191 0.86 -1.1 1,245,099 - Dsui_1191 0.87 -1.8 1,245,154 + Dsui_1191 0.90 -0.2 1,245,164 + -0.2 1,245,164 + -0.1 1,245,172 - -0.9 1,245,172 - -0.3 1,245,172 - -2.7 1,245,247 + -0.1 1,245,255 - -0.1 1,245,255 - -0.3 1,245,272 + -0.2 1,245,272 + -0.3 1,245,272 + -0.3 1,245,280 - -0.6 1,245,280 - -2.0 1,245,299 + -0.6 1,245,309 + -0.7 1,245,309 + +0.4 1,245,309 + +0.2 1,245,317 - -0.7 1,245,317 - -0.5 1,245,317 - -0.5 1,245,319 + -0.2 1,245,319 + -0.6 1,245,319 + -0.3 1,245,327 - -0.9 1,245,327 - -0.6 1,245,327 - -1.7 1,245,327 - -1.1 1,245,327 - -1.9 1,245,382 - -0.3 1,245,393 + -0.5 1,245,408 - -0.3 1,245,413 + -0.1 1,245,421 - -0.7 1,245,449 + -0.5 1,245,449 + -0.4 1,245,452 - -0.6 1,245,452 - -1.2 1,245,457 - -0.2 1,245,662 - +0.7 1,245,704 - -0.3 1,245,720 - -0.3 1,245,731 + -0.5 1,245,859 - Dsui_1193 0.24 -0.9 1,245,866 - Dsui_1193 0.26 +0.7 1,245,915 - Dsui_1193 0.39 +0.7 1,245,967 + Dsui_1193 0.52 -1.0 1,245,976 + Dsui_1193 0.55 -0.4 1,245,981 - Dsui_1193 0.56 -1.3 1,246,000 - Dsui_1193 0.61 +0.7 1,246,058 + Dsui_1193 0.76 -0.4 1,246,120 + -0.2 1,246,132 + -0.2 1,246,145 - -1.3 1,246,149 - +0.7 1,246,156 + +0.0 1,246,164 - -0.3 1,246,164 - +0.7 1,246,182 + -0.4 1,246,182 + -0.4 1,246,182 + -0.5 1,246,182 + -0.4 1,246,182 + -0.5 1,246,190 - +0.7 1,246,190 - +0.7 1,246,192 + -0.2 1,246,198 - -2.1 1,246,217 + -0.5 1,246,219 - -1.3 1,246,252 + -0.1 1,246,270 - -1.6 1,246,280 - -0.3 1,246,283 + -0.1 1,246,283 + -0.1 1,246,283 + -1.0 1,246,291 - -0.9 1,246,317 - -1.3 1,246,348 - Dsui_1194 0.11 +0.7 1,246,367 + Dsui_1194 0.12 -0.4 1,246,367 + Dsui_1194 0.12 -0.0 1,246,616 + Dsui_1194 0.31 -0.1 1,246,624 - +0.7 1,246,628 + Dsui_1194 0.32 -0.3 1,246,636 - Dsui_1194 0.33 +0.7 1,246,782 - Dsui_1194 0.43 +0.7 1,246,899 + Dsui_1194 0.52 -1.0 1,246,909 + Dsui_1194 0.53 -0.3 1,246,917 - Dsui_1194 0.53 +0.7 1,246,917 - Dsui_1194 0.53 +0.7 1,246,951 + Dsui_1194 0.56 +0.6 1,246,980 - Dsui_1194 0.58 -1.6 1,246,986 - Dsui_1194 0.59 +0.7 1,246,992 + Dsui_1194 0.59 +0.2 1,246,997 + Dsui_1194 0.59 -0.3 1,247,002 + Dsui_1194 0.60 -0.1 1,247,072 + Dsui_1194 0.65 -1.6 1,247,104 + Dsui_1194 0.67 -0.1
Or see this region's nucleotide sequence