Strain Fitness in Dechlorosoma suillum PS around Dsui_0992

Experiment: D-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0990 and Dsui_0991 overlap by 14 nucleotidesDsui_0991 and Dsui_0992 overlap by 20 nucleotidesDsui_0992 and Dsui_0993 overlap by 8 nucleotidesDsui_0993 and Dsui_0994 overlap by 1 nucleotides Dsui_0990: Dsui_0990 - putative P-loop-containing kinase, at 1,017,863 to 1,018,735 _0990 Dsui_0991: Dsui_0991 - hypothetical protein, at 1,018,722 to 1,019,150 _0991 Dsui_0992: Dsui_0992 - putative membrane protein, at 1,019,131 to 1,019,706 _0992 Dsui_0993: Dsui_0993 - polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase, at 1,019,699 to 1,020,316 _0993 Dsui_0994: Dsui_0994 - peptidase S16, lon domain protein, at 1,020,316 to 1,020,957 _0994 Position (kb) 1019 1020Strain fitness (log2 ratio) -2 -1 0 1at 1018.374 kb on + strand, within Dsui_0990at 1018.764 kb on + strandat 1018.824 kb on - strandat 1018.935 kb on - strandat 1019.036 kb on - strand, within Dsui_0991at 1019.279 kb on + strand, within Dsui_0992at 1019.433 kb on + strand, within Dsui_0992at 1019.488 kb on - strandat 1019.701 kb on + strandat 1019.709 kb on - strandat 1019.709 kb on - strandat 1019.709 kb on - strandat 1019.709 kb on - strandat 1020.458 kb on - strand, within Dsui_0994at 1020.463 kb on - strandat 1020.500 kb on - strand, within Dsui_0994at 1020.514 kb on + strand, within Dsui_0994

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Lactate (C)
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1,018,374 + Dsui_0990 0.59 -0.9
1,018,764 + -0.6
1,018,824 - +0.8
1,018,935 - +0.8
1,019,036 - Dsui_0991 0.73 -0.2
1,019,279 + Dsui_0992 0.26 -2.7
1,019,433 + Dsui_0992 0.52 -1.8
1,019,488 - +0.8
1,019,701 + -0.2
1,019,709 - -0.2
1,019,709 - -0.2
1,019,709 - -0.2
1,019,709 - -1.5
1,020,458 - Dsui_0994 0.22 +0.8
1,020,463 - +0.8
1,020,500 - Dsui_0994 0.29 -0.7
1,020,514 + Dsui_0994 0.31 -0.3

Or see this region's nucleotide sequence