Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0786 and Dsui_0787 are separated by 10 nucleotides Dsui_0787 and Dsui_0788 overlap by 40 nucleotides Dsui_0788 and Dsui_0789 are separated by 256 nucleotides
Dsui_0786: Dsui_0786 - Fe-S oxidoreductase, at 793,233 to 794,123
_0786
Dsui_0787: Dsui_0787 - putative membrane protein, at 794,134 to 794,580
_0787
Dsui_0788: Dsui_0788 - phosphosulfolactate phosphohydrolase-like enzyme, at 794,541 to 795,278
_0788
Dsui_0789: Dsui_0789 - diguanylate cyclase (GGDEF) domain-containing protein, at 795,535 to 796,566
_0789
Position (kb)
794
795 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 793.154 kb on - strand at 793.169 kb on + strand at 793.287 kb on + strand at 793.326 kb on - strand, within Dsui_0786 at 793.351 kb on - strand, within Dsui_0786 at 793.354 kb on - strand at 793.356 kb on - strand, within Dsui_0786 at 793.427 kb on - strand, within Dsui_0786 at 793.462 kb on - strand, within Dsui_0786 at 793.476 kb on - strand, within Dsui_0786 at 793.476 kb on - strand, within Dsui_0786 at 793.502 kb on + strand, within Dsui_0786 at 793.502 kb on + strand, within Dsui_0786 at 793.561 kb on + strand, within Dsui_0786 at 793.600 kb on - strand, within Dsui_0786 at 793.607 kb on - strand at 793.659 kb on + strand, within Dsui_0786 at 793.662 kb on - strand, within Dsui_0786 at 793.704 kb on - strand, within Dsui_0786 at 793.770 kb on - strand, within Dsui_0786 at 793.948 kb on + strand, within Dsui_0786 at 794.034 kb on + strand, within Dsui_0786 at 794.047 kb on - strand at 794.086 kb on + strand at 794.108 kb on + strand at 794.118 kb on + strand at 794.167 kb on - strand at 794.268 kb on - strand, within Dsui_0787 at 794.294 kb on - strand, within Dsui_0787 at 794.411 kb on + strand, within Dsui_0787 at 794.494 kb on + strand, within Dsui_0787 at 794.505 kb on + strand, within Dsui_0787 at 794.505 kb on + strand, within Dsui_0787 at 794.505 kb on + strand, within Dsui_0787 at 794.513 kb on - strand, within Dsui_0787 at 794.513 kb on - strand, within Dsui_0787 at 794.513 kb on - strand, within Dsui_0787 at 794.575 kb on + strand at 794.657 kb on + strand, within Dsui_0788 at 794.791 kb on + strand at 794.846 kb on + strand, within Dsui_0788 at 794.864 kb on - strand, within Dsui_0788 at 794.864 kb on - strand, within Dsui_0788 at 794.909 kb on - strand, within Dsui_0788 at 794.919 kb on + strand, within Dsui_0788 at 795.040 kb on - strand, within Dsui_0788 at 795.112 kb on - strand, within Dsui_0788 at 795.232 kb on + strand at 795.232 kb on + strand at 795.541 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 793,154 - -0.7 793,169 + -0.2 793,287 + -0.9 793,326 - Dsui_0786 0.10 -1.6 793,351 - Dsui_0786 0.13 +0.8 793,354 - +0.8 793,356 - Dsui_0786 0.14 -0.2 793,427 - Dsui_0786 0.22 -2.4 793,462 - Dsui_0786 0.26 -1.6 793,476 - Dsui_0786 0.27 -2.0 793,476 - Dsui_0786 0.27 +0.2 793,502 + Dsui_0786 0.30 -0.5 793,502 + Dsui_0786 0.30 +0.5 793,561 + Dsui_0786 0.37 -0.5 793,600 - Dsui_0786 0.41 -1.6 793,607 - +0.8 793,659 + Dsui_0786 0.48 -0.1 793,662 - Dsui_0786 0.48 +0.2 793,704 - Dsui_0786 0.53 -0.2 793,770 - Dsui_0786 0.60 -2.2 793,948 + Dsui_0786 0.80 -0.2 794,034 + Dsui_0786 0.90 -0.0 794,047 - -1.0 794,086 + +0.1 794,108 + -0.4 794,118 + -0.5 794,167 - -0.6 794,268 - Dsui_0787 0.30 -1.8 794,294 - Dsui_0787 0.36 -1.8 794,411 + Dsui_0787 0.62 -1.8 794,494 + Dsui_0787 0.81 -2.0 794,505 + Dsui_0787 0.83 -1.7 794,505 + Dsui_0787 0.83 -2.2 794,505 + Dsui_0787 0.83 -1.6 794,513 - Dsui_0787 0.85 -2.0 794,513 - Dsui_0787 0.85 -2.1 794,513 - Dsui_0787 0.85 -1.8 794,575 + -0.4 794,657 + Dsui_0788 0.16 -0.3 794,791 + -0.2 794,846 + Dsui_0788 0.41 -0.7 794,864 - Dsui_0788 0.44 +0.3 794,864 - Dsui_0788 0.44 -0.3 794,909 - Dsui_0788 0.50 -0.7 794,919 + Dsui_0788 0.51 +2.1 795,040 - Dsui_0788 0.68 +0.0 795,112 - Dsui_0788 0.77 -0.3 795,232 + -0.2 795,232 + -0.5 795,541 - +0.8
Or see this region's nucleotide sequence