Strain Fitness in Dechlorosoma suillum PS around Dsui_0213

Experiment: D-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0210 and Dsui_0211 are separated by 9 nucleotidesDsui_0211 and Dsui_0212 are separated by 57 nucleotidesDsui_0212 and Dsui_0213 overlap by 8 nucleotidesDsui_0213 and Dsui_0214 overlap by 14 nucleotidesDsui_0214 and Dsui_0215 are separated by 2 nucleotidesDsui_0215 and Dsui_0216 overlap by 4 nucleotides Dsui_0210: Dsui_0210 - hypothetical protein, at 211,630 to 213,639 _0210 Dsui_0211: Dsui_0211 - hypothetical protein, at 213,649 to 213,831 _0211 Dsui_0212: Dsui_0212 - hypothetical protein, at 213,889 to 214,266 _0212 Dsui_0213: Dsui_0213 - hypothetical protein, at 214,259 to 214,603 _0213 Dsui_0214: Dsui_0214 - TIGR02594 family protein, at 214,590 to 215,081 _0214 Dsui_0215: Dsui_0215 - hypothetical protein, at 215,084 to 215,500 _0215 Dsui_0216: Dsui_0216 - hypothetical protein, at 215,497 to 215,766 _0216 Position (kb) 214 215Strain fitness (log2 ratio) -2 -1 0 1at 213.326 kb on + strand, within Dsui_0210at 213.350 kb on - strand, within Dsui_0210at 213.562 kb on + strandat 213.671 kb on + strand, within Dsui_0211at 213.679 kb on - strandat 213.843 kb on - strandat 213.952 kb on - strandat 213.952 kb on - strand, within Dsui_0212at 214.242 kb on + strandat 214.242 kb on + strandat 214.284 kb on + strandat 214.301 kb on + strand, within Dsui_0213at 214.312 kb on - strandat 214.316 kb on + strand, within Dsui_0213at 214.324 kb on - strand, within Dsui_0213at 214.324 kb on - strand, within Dsui_0213at 214.324 kb on - strandat 214.349 kb on - strandat 214.429 kb on - strandat 214.621 kb on + strandat 214.627 kb on + strandat 214.671 kb on + strandat 214.675 kb on + strand, within Dsui_0214at 214.691 kb on + strand, within Dsui_0214at 214.816 kb on + strand, within Dsui_0214at 214.830 kb on + strand, within Dsui_0214at 214.981 kb on - strand, within Dsui_0214at 215.216 kb on - strand, within Dsui_0215at 215.226 kb on - strand, within Dsui_0215at 215.365 kb on - strandat 215.450 kb on + strand, within Dsui_0215at 215.482 kb on + strandat 215.494 kb on + strandat 215.495 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Lactate (C)
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213,326 + Dsui_0210 0.84 +0.7
213,350 - Dsui_0210 0.86 -0.9
213,562 + -1.6
213,671 + Dsui_0211 0.12 +0.7
213,679 - +0.7
213,843 - +0.7
213,952 - -0.3
213,952 - Dsui_0212 0.17 -1.3
214,242 + +0.7
214,242 + -0.9
214,284 + +0.7
214,301 + Dsui_0213 0.12 +0.7
214,312 - +0.7
214,316 + Dsui_0213 0.17 +0.7
214,324 - Dsui_0213 0.19 +0.7
214,324 - Dsui_0213 0.19 +0.7
214,324 - -0.3
214,349 - +0.7
214,429 - +0.7
214,621 + -1.9
214,627 + +0.7
214,671 + -0.3
214,675 + Dsui_0214 0.17 +0.7
214,691 + Dsui_0214 0.21 -0.3
214,816 + Dsui_0214 0.46 -0.3
214,830 + Dsui_0214 0.49 -1.3
214,981 - Dsui_0214 0.79 -1.3
215,216 - Dsui_0215 0.32 +0.7
215,226 - Dsui_0215 0.34 +0.7
215,365 - +0.7
215,450 + Dsui_0215 0.88 -0.3
215,482 + +0.6
215,494 + +0.7
215,495 - -0.3

Or see this region's nucleotide sequence