Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03773

Experiment: PYE 0.5x 25C survival rep3 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 25C survival rep3 12 days
3,939,469	-		CCNA_03771	0.47	-1.0
3,939,484	+		CCNA_03771	0.48	-0.5
3,939,503	-		CCNA_03771	0.50	+1.3
3,939,563	+		CCNA_03771	0.56	-2.3
3,939,563	+		CCNA_03771	0.56	-1.2
3,939,563	+		CCNA_03771	0.56	-0.4
3,939,569	-		CCNA_03771	0.56	+1.0
3,939,650	+		CCNA_03771	0.64	-1.6
3,939,672	+		CCNA_03771	0.66	-0.2
3,939,672	+		CCNA_03771	0.66	-0.6
3,939,675	-		CCNA_03771	0.66	-2.0
3,939,680	-		CCNA_03771	0.67	-1.9
3,939,680	-		CCNA_03771	0.67	-1.7
3,939,691	+		CCNA_03771	0.68	-0.1
3,939,693	+		CCNA_03771	0.68	-0.6
3,939,693	+		CCNA_03771	0.68	+0.0
3,939,713	+		CCNA_03771	0.70	-0.9
3,939,713	+		CCNA_03771	0.70	-1.0
3,939,721	-				-0.0
3,939,721	-		CCNA_03771	0.71	-0.4
3,939,721	-		CCNA_03771	0.71	-0.2
3,939,723	+		CCNA_03771	0.71	-0.6
3,939,739	-		CCNA_03771	0.72	-1.8
3,939,739	-		CCNA_03771	0.72	-1.6
3,939,745	+		CCNA_03771	0.73	-1.1
3,939,747	-		CCNA_03771	0.73	-2.3
3,939,754	-		CCNA_03771	0.74	+0.1
3,939,760	+		CCNA_03771	0.74	-0.2
3,939,760	+		CCNA_03771	0.74	-0.6
3,939,770	+				+1.6
3,939,777	+		CCNA_03771	0.76	-0.1
3,939,778	-		CCNA_03771	0.76	-2.4
3,939,780	-		CCNA_03771	0.76	-1.4
3,939,782	+		CCNA_03771	0.77	-0.8
3,939,790	-		CCNA_03771	0.77	-0.9
3,939,826	-		CCNA_03771	0.81	-0.8
3,939,831	-		CCNA_03771	0.81	-2.0
3,939,842	+		CCNA_03771	0.82	+0.2
3,939,842	+		CCNA_03771	0.82	-0.5
3,939,842	+		CCNA_03771	0.82	+1.0
3,939,842	+		CCNA_03771	0.82	-0.1
3,939,850	-		CCNA_03771	0.83	-1.2
3,939,850	-		CCNA_03771	0.83	-0.6
3,939,860	+		CCNA_03771	0.84	+0.1
3,939,860	+		CCNA_03771	0.84	-1.2
3,939,860	+		CCNA_03771	0.84	-1.0
3,939,860	+		CCNA_03771	0.84	-0.2
3,939,865	+		CCNA_03771	0.84	-1.2
3,939,865	+		CCNA_03771	0.84	-0.5
3,939,893	+		CCNA_03771	0.87	-0.5
3,939,894	-		CCNA_03771	0.87	-2.2
3,939,955	+				-0.9
3,940,010	+				+0.2
3,940,018	-				+1.6
3,940,028	+				+0.3
3,940,042	-				+0.1
3,940,049	+				+2.7
3,940,068	+		CCNA_03772	0.11	-0.1
3,940,117	+		CCNA_03772	0.23	-1.0
3,940,117	+		CCNA_03772	0.23	+0.1
3,940,125	-		CCNA_03772	0.25	-0.5
3,940,125	-		CCNA_03772	0.25	+0.3
3,940,133	+		CCNA_03772	0.27	+0.4
3,940,152	-		CCNA_03772	0.31	-0.7
3,940,182	-		CCNA_03772	0.38	+0.5
3,940,185	-		CCNA_03772	0.39	-0.1
3,940,236	+		CCNA_03772	0.51	-0.1
3,940,244	-		CCNA_03772	0.53	+0.9
3,940,289	-		CCNA_03772	0.63	-1.1
3,940,294	-		CCNA_03772	0.64	-0.1
3,940,297	+		CCNA_03772	0.65	-0.8
3,940,312	+		CCNA_03772	0.69	-0.3
3,940,317	+		CCNA_03772	0.70	-0.4
3,940,349	+		CCNA_03772	0.77	+0.4
3,940,349	+		CCNA_03772	0.77	+0.4
3,940,359	+		CCNA_03772	0.80	-0.1
3,940,359	+		CCNA_03772	0.80	-0.4
3,940,367	-		CCNA_03772	0.81	+0.1
3,940,367	-		CCNA_03772	0.81	-0.6
3,940,373	-		CCNA_03772	0.83	+0.4
3,940,380	-		CCNA_03772	0.85	-0.4
3,940,380	-		CCNA_03772	0.85	+0.0
3,940,382	+		CCNA_03772	0.85	+0.3
3,940,382	+		CCNA_03772	0.85	-0.2
3,940,382	+		CCNA_03772	0.85	-0.2
3,940,382	+		CCNA_03772	0.85	-0.2
3,940,382	+		CCNA_03772	0.85	-0.8
3,940,385	-		CCNA_03772	0.86	-0.3
3,940,385	-		CCNA_03772	0.86	+0.9
3,940,390	-		CCNA_03772	0.87	-1.6
3,940,390	-		CCNA_03772	0.87	-0.5
3,940,390	-		CCNA_03772	0.87	-1.1
3,940,390	-		CCNA_03772	0.87	+0.2
3,940,448	-				+0.1
3,940,448	-				-0.6
3,940,455	+				-0.5
3,940,455	+				+0.5
3,940,485	-				+0.7
3,940,488	+				+0.6
3,940,489	+				+0.7
3,940,491	-				+0.9
3,940,496	-				+1.0
3,940,496	-				+0.8
3,940,513	+				+0.1
3,940,513	+				+1.4
3,940,521	-				+0.7
3,940,521	-				+0.8
3,940,521	-				+0.9
3,940,543	+				+0.2
3,940,585	+		CCNA_03773	0.11	+1.3
3,940,594	+		CCNA_03773	0.12	+0.7
3,940,594	+		CCNA_03773	0.12	-0.1
3,940,602	+		CCNA_03773	0.12	+1.4
3,940,602	-		CCNA_03773	0.12	+0.9
3,940,602	-		CCNA_03773	0.12	+0.8
3,940,674	+		CCNA_03773	0.18	+1.3
3,940,677	-		CCNA_03773	0.19	+1.0
3,940,687	+		CCNA_03773	0.19	+1.5
3,940,749	-		CCNA_03773	0.25	+1.1
3,940,770	-		CCNA_03773	0.27	+1.1
3,940,772	+		CCNA_03773	0.27	+0.9
3,940,772	+		CCNA_03773	0.27	+0.2
3,940,780	-		CCNA_03773	0.27	+0.8
3,940,780	-		CCNA_03773	0.27	+0.8
3,940,806	+		CCNA_03773	0.30	+0.4
3,940,889	+		CCNA_03773	0.37	+1.7
3,940,897	-		CCNA_03773	0.37	+0.7
3,940,938	-		CCNA_03773	0.41	+1.0
3,940,971	+		CCNA_03773	0.44	+0.9
3,940,978	+		CCNA_03773	0.44	+0.6
3,940,978	+		CCNA_03773	0.44	+2.1
3,940,978	+		CCNA_03773	0.44	-0.9
3,940,978	+		CCNA_03773	0.44	+1.8
3,940,978	+		CCNA_03773	0.44	+0.8
3,940,978	+		CCNA_03773	0.44	+1.4
3,940,980	+		CCNA_03773	0.44	+0.7
3,940,985	+		CCNA_03773	0.45	+0.5
3,940,986	-		CCNA_03773	0.45	+0.7
3,940,986	-		CCNA_03773	0.45	+1.3
3,940,986	-		CCNA_03773	0.45	+0.8
3,940,988	-		CCNA_03773	0.45	+1.0
3,940,988	-		CCNA_03773	0.45	+1.1
3,941,068	+		CCNA_03773	0.52	+1.5
3,941,068	+		CCNA_03773	0.52	+1.9
3,941,076	-		CCNA_03773	0.53	+0.6
3,941,076	-		CCNA_03773	0.53	+1.5
3,941,090	-		CCNA_03773	0.54	+1.3
3,941,090	-		CCNA_03773	0.54	+0.8
3,941,092	+		CCNA_03773	0.54	+0.8
3,941,100	-		CCNA_03773	0.55	+1.1
3,941,112	-		CCNA_03773	0.56	+1.2
3,941,113	-		CCNA_03773	0.56	+0.7
3,941,124	-		CCNA_03773	0.57	+1.0
3,941,228	-		CCNA_03773	0.65	+1.4
3,941,247	+		CCNA_03773	0.67	+0.7
3,941,247	+		CCNA_03773	0.67	+0.6
3,941,254	-		CCNA_03773	0.68	+0.7
3,941,254	-		CCNA_03773	0.68	+0.8
3,941,254	-		CCNA_03773	0.68	+0.8
3,941,293	+		CCNA_03773	0.71	+1.0
3,941,293	+		CCNA_03773	0.71	-0.7
3,941,301	-		CCNA_03773	0.72	+1.0
3,941,308	-		CCNA_03773	0.72	+2.0
3,941,310	+		CCNA_03773	0.72	-0.4
3,941,329	+		CCNA_03773	0.74	+0.8
3,941,365	+		CCNA_03773	0.77	+0.3
3,941,436	-		CCNA_03773	0.83	+1.2
3,941,436	-		CCNA_03773	0.83	+1.0
3,941,494	-		CCNA_03773	0.88	+0.0
3,941,499	-		CCNA_03773	0.89	-0.9
3,941,501	+		CCNA_03773	0.89	+0.7
3,941,501	+		CCNA_03773	0.89	+0.1
3,941,508	-				-0.0
3,941,509	-				+0.1
3,941,509	-				-1.0
3,941,514	-				-0.5
3,941,568	+				-0.5
3,941,577	-				-0.9
3,941,630	+				-1.6
3,941,656	+		CCNA_03774	0.17	-2.2
3,941,656	+		CCNA_03774	0.17	-1.1
3,941,656	+		CCNA_03774	0.17	-0.7
3,941,656	+		CCNA_03774	0.17	-0.8
3,941,656	+		CCNA_03774	0.17	+1.0
3,941,664	-		CCNA_03774	0.18	+0.3
3,941,664	-		CCNA_03774	0.18	-1.5
3,941,664	-		CCNA_03774	0.18	-0.9
3,941,680	+		CCNA_03774	0.20	-0.0
3,941,722	+		CCNA_03774	0.25	+0.4
3,941,730	-		CCNA_03774	0.26	-0.8
3,941,771	+		CCNA_03774	0.30	-0.5
3,941,773	+		CCNA_03774	0.30	-2.3
3,941,779	-		CCNA_03774	0.31	-0.1
3,941,780	+		CCNA_03774	0.31	+0.6
3,941,780	-		CCNA_03774	0.31	-1.9
3,941,796	-		CCNA_03774	0.33	-1.0
3,941,865	-		CCNA_03774	0.41	-1.1
3,941,918	-		CCNA_03774	0.47	-0.6
3,941,951	+		CCNA_03774	0.50	-0.3
3,941,957	-		CCNA_03774	0.51	-0.0
3,942,005	+		CCNA_03774	0.57	-0.2
3,942,017	+		CCNA_03774	0.58	-1.5
3,942,025	-		CCNA_03774	0.59	-2.0
3,942,029	+		CCNA_03774	0.59	-0.2
3,942,034	+		CCNA_03774	0.60	-1.5
3,942,037	-		CCNA_03774	0.60	-1.4
3,942,037	-		CCNA_03774	0.60	-0.8
3,942,042	-		CCNA_03774	0.61	-0.3
3,942,044	+		CCNA_03774	0.61	-1.7
3,942,051	+		CCNA_03774	0.62	-1.8
3,942,051	+		CCNA_03774	0.62	+0.7
3,942,067	-		CCNA_03774	0.64	+0.9
3,942,074	-		CCNA_03774	0.64	-0.3
3,942,091	-		CCNA_03774	0.66	-0.7
3,942,091	-		CCNA_03774	0.66	+0.6
3,942,110	-		CCNA_03774	0.68	+0.2
3,942,116	-		CCNA_03774	0.69	-1.1
3,942,186	-		CCNA_03774	0.77	-0.5
3,942,195	+		CCNA_03774	0.78	-0.0
3,942,274	-		CCNA_03774	0.87	+0.6
3,942,277	+		CCNA_03774	0.87	-0.8
3,942,323	+				-2.5
3,942,341	+				-0.0
3,942,343	+				+1.0
3,942,349	-				-0.0
3,942,349	-				-1.3
3,942,349	-				+0.6
3,942,351	-				-0.8
3,942,351	-				+1.6
3,942,354	-				-0.4
3,942,406	-				-1.1
3,942,416	-				-1.7
3,942,416	-				-1.1
3,942,416	-				+0.5
3,942,420	+				-1.1
3,942,420	+				-0.2
3,942,425	+				-0.9
3,942,428	-				-1.6
3,942,428	-				-0.1
3,942,428	-				-1.3
3,942,435	-				-0.6
3,942,435	-				-0.6
3,942,515	+				+0.3
3,942,515	+				-1.5
3,942,518	-				-0.7
3,942,521	+				+0.2
3,942,521	+				-0.8
3,942,625	+		CCNA_03775	0.26	-1.2