Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11870

Experiment: Ammonium chloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11865 and BWI76_RS11870 are separated by 9 nucleotidesBWI76_RS11870 and BWI76_RS11875 are separated by 29 nucleotides BWI76_RS11865: BWI76_RS11865 - phosphatase, at 2,495,850 to 2,496,719 _RS11865 BWI76_RS11870: BWI76_RS11870 - hypothetical protein, at 2,496,729 to 2,497,349 _RS11870 BWI76_RS11875: BWI76_RS11875 - hypothetical protein, at 2,497,379 to 2,499,277 _RS11875 Position (kb) 2496 2497 2498Strain fitness (log2 ratio) -1 0 1at 2495.946 kb on + strand, within BWI76_RS11865at 2496.480 kb on - strand, within BWI76_RS11865at 2496.541 kb on - strand, within BWI76_RS11865at 2496.588 kb on + strand, within BWI76_RS11865at 2496.691 kb on + strandat 2496.691 kb on + strandat 2496.699 kb on - strandat 2496.699 kb on - strandat 2496.815 kb on - strand, within BWI76_RS11870at 2496.927 kb on - strand, within BWI76_RS11870at 2497.015 kb on + strand, within BWI76_RS11870at 2497.072 kb on + strand, within BWI76_RS11870at 2497.083 kb on + strand, within BWI76_RS11870at 2497.205 kb on + strand, within BWI76_RS11870at 2497.205 kb on + strand, within BWI76_RS11870at 2497.423 kb on + strandat 2497.479 kb on + strandat 2497.827 kb on + strand, within BWI76_RS11875at 2498.121 kb on + strand, within BWI76_RS11875

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium chloride (N)
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2,495,946 + BWI76_RS11865 0.11 +0.1
2,496,480 - BWI76_RS11865 0.72 +0.9
2,496,541 - BWI76_RS11865 0.79 +0.2
2,496,588 + BWI76_RS11865 0.85 +0.1
2,496,691 + +0.6
2,496,691 + +0.4
2,496,699 - -0.3
2,496,699 - -1.3
2,496,815 - BWI76_RS11870 0.14 +0.1
2,496,927 - BWI76_RS11870 0.32 -0.3
2,497,015 + BWI76_RS11870 0.46 +0.9
2,497,072 + BWI76_RS11870 0.55 -0.3
2,497,083 + BWI76_RS11870 0.57 -0.5
2,497,205 + BWI76_RS11870 0.77 +0.3
2,497,205 + BWI76_RS11870 0.77 +0.3
2,497,423 + +0.4
2,497,479 + +0.0
2,497,827 + BWI76_RS11875 0.24 -0.3
2,498,121 + BWI76_RS11875 0.39 -0.8

Or see this region's nucleotide sequence