Experiment: 2 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1046 and DvMF_1047 are separated by 71 nucleotides DvMF_1047 and DvMF_1048 are separated by 289 nucleotides DvMF_1048 and DvMF_1049 are separated by 34 nucleotides
DvMF_1046: DvMF_1046 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 1,271,731 to 1,272,522
_1046
DvMF_1047: DvMF_1047 - Rhodanese domain protein (RefSeq), at 1,272,594 to 1,273,151
_1047
DvMF_1048: DvMF_1048 - Sel1 domain protein repeat-containing protein (RefSeq), at 1,273,441 to 1,275,138
_1048
DvMF_1049: DvMF_1049 - major facilitator superfamily MFS_1 (RefSeq), at 1,275,173 to 1,276,438
_1049
Position (kb)
1273
1274
1275
1276 Strain fitness (log2 ratio)
-1
0
1 at 1272.612 kb on - strand at 1272.638 kb on - strand at 1272.938 kb on - strand, within DvMF_1047 at 1272.945 kb on + strand, within DvMF_1047 at 1273.136 kb on - strand at 1273.332 kb on - strand at 1273.740 kb on + strand, within DvMF_1048 at 1273.828 kb on + strand, within DvMF_1048 at 1273.921 kb on + strand, within DvMF_1048 at 1274.108 kb on - strand, within DvMF_1048 at 1274.148 kb on + strand, within DvMF_1048 at 1274.148 kb on + strand, within DvMF_1048 at 1274.156 kb on - strand, within DvMF_1048 at 1274.269 kb on + strand, within DvMF_1048 at 1274.407 kb on + strand, within DvMF_1048 at 1274.408 kb on - strand, within DvMF_1048 at 1274.516 kb on - strand, within DvMF_1048 at 1274.525 kb on + strand, within DvMF_1048 at 1274.700 kb on + strand, within DvMF_1048 at 1275.447 kb on + strand, within DvMF_1049 at 1275.550 kb on - strand, within DvMF_1049 at 1275.707 kb on + strand, within DvMF_1049 at 1275.713 kb on + strand, within DvMF_1049 at 1275.749 kb on - strand, within DvMF_1049 at 1275.749 kb on - strand, within DvMF_1049 at 1275.836 kb on + strand, within DvMF_1049 at 1275.972 kb on - strand, within DvMF_1049 at 1276.046 kb on + strand, within DvMF_1049
Per-strain Table
Position Strand Gene LocusTag Fraction 2 day starvation, 30C remove 1,272,612 - +1.3 1,272,638 - +0.5 1,272,938 - DvMF_1047 0.62 -0.1 1,272,945 + DvMF_1047 0.63 +0.3 1,273,136 - +0.8 1,273,332 - +0.5 1,273,740 + DvMF_1048 0.18 -0.3 1,273,828 + DvMF_1048 0.23 -0.2 1,273,921 + DvMF_1048 0.28 +0.0 1,274,108 - DvMF_1048 0.39 +0.0 1,274,148 + DvMF_1048 0.42 -0.1 1,274,148 + DvMF_1048 0.42 +0.4 1,274,156 - DvMF_1048 0.42 -1.5 1,274,269 + DvMF_1048 0.49 +0.2 1,274,407 + DvMF_1048 0.57 +0.0 1,274,408 - DvMF_1048 0.57 -0.2 1,274,516 - DvMF_1048 0.63 +0.2 1,274,525 + DvMF_1048 0.64 -0.4 1,274,700 + DvMF_1048 0.74 +0.1 1,275,447 + DvMF_1049 0.22 +0.9 1,275,550 - DvMF_1049 0.30 +1.5 1,275,707 + DvMF_1049 0.42 +0.4 1,275,713 + DvMF_1049 0.43 -0.7 1,275,749 - DvMF_1049 0.45 +0.0 1,275,749 - DvMF_1049 0.45 +0.7 1,275,836 + DvMF_1049 0.52 +0.1 1,275,972 - DvMF_1049 0.63 +0.2 1,276,046 + DvMF_1049 0.69 +0.4
Or see this region's nucleotide sequence