Experiment: 2 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0330 and DvMF_0331 are separated by 1 nucleotides DvMF_0331 and DvMF_0332 are separated by 5 nucleotides
DvMF_0330: DvMF_0330 - iron-containing alcohol dehydrogenase (RefSeq), at 384,682 to 385,824
_0330
DvMF_0331: DvMF_0331 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 385,826 to 387,151
_0331
DvMF_0332: DvMF_0332 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 387,157 to 388,566
_0332
Position (kb) 385
386
387
388 Strain fitness (log2 ratio) -1
0
1 at 384.930 kb on - strand, within DvMF_0330 at 384.949 kb on - strand, within DvMF_0330 at 385.416 kb on - strand, within DvMF_0330 at 385.498 kb on + strand, within DvMF_0330 at 385.508 kb on + strand, within DvMF_0330 at 385.635 kb on + strand, within DvMF_0330 at 385.823 kb on - strand at 386.104 kb on + strand, within DvMF_0331 at 386.495 kb on - strand, within DvMF_0331 at 386.600 kb on - strand, within DvMF_0331 at 386.606 kb on - strand, within DvMF_0331 at 386.606 kb on - strand, within DvMF_0331 at 386.618 kb on + strand, within DvMF_0331 at 386.663 kb on - strand, within DvMF_0331 at 386.689 kb on + strand, within DvMF_0331 at 386.773 kb on + strand, within DvMF_0331 at 386.785 kb on + strand, within DvMF_0331 at 386.788 kb on - strand, within DvMF_0331 at 386.822 kb on - strand, within DvMF_0331 at 386.846 kb on + strand, within DvMF_0331 at 386.883 kb on + strand, within DvMF_0331 at 387.153 kb on - strand at 387.299 kb on + strand, within DvMF_0332 at 387.433 kb on - strand, within DvMF_0332 at 387.505 kb on - strand, within DvMF_0332 at 387.616 kb on - strand, within DvMF_0332 at 387.695 kb on - strand, within DvMF_0332 at 387.798 kb on + strand, within DvMF_0332
Per-strain Table
Position Strand Gene LocusTag Fraction 2 day starvation, 30C remove 384,930 - DvMF_0330 0.22 +0.9 384,949 - DvMF_0330 0.23 +1.0 385,416 - DvMF_0330 0.64 +0.6 385,498 + DvMF_0330 0.71 +0.9 385,508 + DvMF_0330 0.72 +0.8 385,635 + DvMF_0330 0.83 +0.7 385,823 - -0.2 386,104 + DvMF_0331 0.21 +0.7 386,495 - DvMF_0331 0.50 +0.7 386,600 - DvMF_0331 0.58 +0.3 386,606 - DvMF_0331 0.59 +0.9 386,606 - DvMF_0331 0.59 +0.7 386,618 + DvMF_0331 0.60 +1.1 386,663 - DvMF_0331 0.63 +0.4 386,689 + DvMF_0331 0.65 +0.8 386,773 + DvMF_0331 0.71 +0.9 386,785 + DvMF_0331 0.72 +0.6 386,788 - DvMF_0331 0.73 +0.6 386,822 - DvMF_0331 0.75 +0.6 386,846 + DvMF_0331 0.77 +1.7 386,883 + DvMF_0331 0.80 +1.4 387,153 - +0.9 387,299 + DvMF_0332 0.10 +0.9 387,433 - DvMF_0332 0.20 +1.1 387,505 - DvMF_0332 0.25 +0.5 387,616 - DvMF_0332 0.33 +1.6 387,695 - DvMF_0332 0.38 +0.6 387,798 + DvMF_0332 0.45 +0.4
Or see this region's nucleotide sequence