Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4009

Experiment: m.b. Spectinomycin 0.0015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.0015 mg/ml
76,305	-				+0.1
76,329	+				+0.2
76,406	+				-0.4
76,406	+				-0.7
76,406	+				-0.6
76,406	+				+0.3
76,406	+				+0.6
76,406	+				-0.8
76,411	+				+0.4
76,418	+				-0.5
76,426	+				+1.9
76,432	+				+0.6
76,437	-				-0.0
76,449	+				-0.7
76,454	+				-0.0
76,454	+				-0.4
76,454	+				+0.6
76,454	+				+1.0
76,454	+				+0.6
76,462	-				-0.0
76,472	-				-0.1
76,494	+				-0.3
76,500	+				-0.4
76,500	+				+0.6
76,502	-				-0.3
76,502	-				-0.7
76,502	-				-0.7
76,508	-				+0.1
76,568	+				-0.6
76,568	-				-0.5
76,590	+				-0.4
76,591	+				-0.4
76,618	-				-0.3
76,633	-				-0.2
77,019	+				-1.0
77,025	+				-0.7
77,025	+				-0.6
77,104	+				+0.4
77,106	-				-0.9
77,112	-				+0.0
77,112	-				+1.2
77,112	-				+0.2
77,143	+				-0.5
77,143	+				-0.8
77,159	-				-0.3
77,190	+				-0.4
77,192	+				-0.6
77,194	-				-0.3
77,195	+				-0.6
77,196	-				-0.5
77,198	-				-0.3
77,200	-				+0.1
77,200	-				-0.3
77,200	-				+0.1
77,203	-				-2.0
77,203	-				-0.7
77,205	-				-0.1
77,208	-				+1.0
77,210	-				+0.4
77,211	+				+0.2
77,234	+				+0.3
77,235	+				-0.0
77,242	-				-0.3
77,242	-				+0.3
77,242	-				+0.0
77,245	+				+0.3
77,253	+				-1.2
77,273	-				-0.5
77,277	+				-1.5
77,295	+				+0.6
77,295	+				-0.4
77,295	+				+0.6
77,295	+				-0.0
77,295	+				-1.0
77,303	-				-0.3
77,303	-				-0.1
77,303	-				-2.2
77,303	-				+0.1
77,303	-				-0.1
77,303	-				-0.2
77,303	-				+0.1
77,303	-				+0.3
77,316	+				-0.7
77,332	-				-0.2
77,332	-				-0.3
77,337	-				-0.2
77,346	-				-1.7
77,352	+				-0.0
77,352	+				-0.6
77,360	-				-0.7
77,373	+				-0.6
77,431	-		Dshi_4009	0.15	-0.9
77,464	+		Dshi_4009	0.19	-0.5
77,472	-		Dshi_4009	0.20	-0.7
77,472	-		Dshi_4009	0.20	-0.3
77,473	-		Dshi_4009	0.20	-1.6
77,474	-		Dshi_4009	0.20	-0.1
77,477	-		Dshi_4009	0.20	+0.3
77,488	+		Dshi_4009	0.21	-0.5
77,488	+		Dshi_4009	0.21	+0.4
77,520	+		Dshi_4009	0.25	+1.0
77,528	+		Dshi_4009	0.26	+0.7
77,528	-		Dshi_4009	0.26	-1.7
77,528	-		Dshi_4009	0.26	+0.6
77,530	+		Dshi_4009	0.26	-0.4
77,530	+		Dshi_4009	0.26	-0.5
77,530	-		Dshi_4009	0.26	+0.3
77,537	+		Dshi_4009	0.27	-0.3
77,537	+		Dshi_4009	0.27	-0.4
77,537	+		Dshi_4009	0.27	-0.3
77,537	+		Dshi_4009	0.27	-0.6
77,542	+		Dshi_4009	0.28	-0.3
77,542	+		Dshi_4009	0.28	-0.3
77,542	+		Dshi_4009	0.28	-0.1
77,542	+		Dshi_4009	0.28	-0.3
77,542	+		Dshi_4009	0.28	+1.1
77,542	+		Dshi_4009	0.28	-0.3
77,542	+		Dshi_4009	0.28	-0.3
77,542	+		Dshi_4009	0.28	+0.1
77,542	+		Dshi_4009	0.28	-1.3
77,543	+		Dshi_4009	0.28	-0.1
77,545	-		Dshi_4009	0.28	+0.6
77,545	-		Dshi_4009	0.28	-1.0
77,545	-		Dshi_4009	0.28	-0.6
77,547	+		Dshi_4009	0.28	-1.2
77,547	+		Dshi_4009	0.28	-0.9
77,550	-		Dshi_4009	0.29	-0.2
77,550	-		Dshi_4009	0.29	-1.0
77,550	-		Dshi_4009	0.29	+0.6
77,550	-		Dshi_4009	0.29	-0.9
77,550	-		Dshi_4009	0.29	-0.2
77,550	-		Dshi_4009	0.29	-0.6
77,550	-		Dshi_4009	0.29	-0.3
77,550	-		Dshi_4009	0.29	-0.7
77,550	-		Dshi_4009	0.29	-1.6
77,550	-		Dshi_4009	0.29	-1.8
77,550	-		Dshi_4009	0.29	-1.4
77,550	-		Dshi_4009	0.29	+0.1
77,550	-		Dshi_4009	0.29	-1.8
77,550	-		Dshi_4009	0.29	-0.0
77,550	-		Dshi_4009	0.29	-0.5
77,550	-		Dshi_4009	0.29	+0.1
77,550	-		Dshi_4009	0.29	-0.6
77,550	-		Dshi_4009	0.29	+1.0
77,555	-		Dshi_4009	0.29	-0.2
77,558	+		Dshi_4009	0.30	-0.3
77,560	-		Dshi_4009	0.30	-0.4
77,655	+		Dshi_4009	0.41	+1.0
77,655	+		Dshi_4009	0.41	+0.1
77,663	+		Dshi_4009	0.42	+0.1
77,663	+		Dshi_4009	0.42	-0.1
77,663	-				-0.4
77,663	-		Dshi_4009	0.42	-0.2
77,663	-		Dshi_4009	0.42	-0.5
77,663	-		Dshi_4009	0.42	-0.5
77,665	+		Dshi_4009	0.42	-1.3
77,665	+		Dshi_4009	0.42	-1.0
77,669	-		Dshi_4009	0.43	-0.4
77,670	+		Dshi_4009	0.43	+0.1
77,672	-		Dshi_4009	0.43	-0.4
77,673	-		Dshi_4009	0.43	+0.0
77,673	-		Dshi_4009	0.43	+1.2
77,673	-		Dshi_4009	0.43	-0.2
77,676	-		Dshi_4009	0.43	+0.4
77,678	-		Dshi_4009	0.44	-0.2
77,685	+		Dshi_4009	0.44	-0.9
77,685	+		Dshi_4009	0.44	+0.4
77,688	-		Dshi_4009	0.45	+0.3
77,693	-		Dshi_4009	0.45	-0.5
77,695	+		Dshi_4009	0.46	+1.4
77,748	+		Dshi_4009	0.52	+0.2
77,758	+		Dshi_4009	0.53	-0.4
77,766	-		Dshi_4009	0.54	+0.4
77,766	-		Dshi_4009	0.54	-0.2
77,766	-		Dshi_4009	0.54	+0.6
77,768	+		Dshi_4009	0.54	-0.6
77,773	+		Dshi_4009	0.55	-0.6
77,776	+		Dshi_4009	0.55	-0.1
77,776	+		Dshi_4009	0.55	+0.1
77,776	+		Dshi_4009	0.55	+0.3
77,776	-		Dshi_4009	0.55	-0.1
77,776	-		Dshi_4009	0.55	+0.6
77,776	-		Dshi_4009	0.55	-0.5
77,777	+		Dshi_4009	0.55	-0.7
77,784	-		Dshi_4009	0.56	-1.4
77,784	-		Dshi_4009	0.56	-0.5
77,784	-		Dshi_4009	0.56	-0.3
77,784	-		Dshi_4009	0.56	+0.2
77,784	-		Dshi_4009	0.56	+0.1
77,800	+		Dshi_4009	0.58	-0.2
77,834	-		Dshi_4009	0.62	-0.4
77,839	-		Dshi_4009	0.62	-0.0
77,844	-		Dshi_4009	0.63	-0.1
77,863	+		Dshi_4009	0.65	-0.3
77,903	+		Dshi_4009	0.70	+0.0
77,911	-		Dshi_4009	0.71	-0.4
77,913	-		Dshi_4009	0.71	-0.7
77,915	-		Dshi_4009	0.71	-0.3
77,925	+		Dshi_4009	0.72	+0.3
77,925	+		Dshi_4009	0.72	-0.2
77,925	+		Dshi_4009	0.72	+1.6
77,925	+		Dshi_4009	0.72	+0.3
77,925	+		Dshi_4009	0.72	+0.8
77,925	+		Dshi_4009	0.72	-0.1
77,925	+		Dshi_4009	0.72	+0.1
77,925	+		Dshi_4009	0.72	-0.2
77,925	+		Dshi_4009	0.72	-0.2
77,925	+		Dshi_4009	0.72	-0.4
77,925	+		Dshi_4009	0.72	+1.5
77,925	+		Dshi_4009	0.72	-0.4
77,925	+		Dshi_4009	0.72	-0.2
77,925	+		Dshi_4009	0.72	+0.4
77,925	+		Dshi_4009	0.72	+0.3
77,925	+		Dshi_4009	0.72	+0.9
77,925	+		Dshi_4009	0.72	+1.0
77,925	+		Dshi_4009	0.72	-0.0
77,931	+		Dshi_4009	0.73	-0.7
77,933	-		Dshi_4009	0.73	-0.2
77,933	-		Dshi_4009	0.73	+0.1
77,933	-		Dshi_4009	0.73	-0.3
77,933	-		Dshi_4009	0.73	-0.2
77,933	-		Dshi_4009	0.73	+0.1
77,933	-		Dshi_4009	0.73	+0.2
77,933	-		Dshi_4009	0.73	+0.4
77,933	-		Dshi_4009	0.73	+0.7
77,933	-		Dshi_4009	0.73	-1.2
77,933	-		Dshi_4009	0.73	-0.4
77,933	-		Dshi_4009	0.73	-0.5
77,933	-		Dshi_4009	0.73	+0.2
77,933	-		Dshi_4009	0.73	+0.1
77,961	+		Dshi_4009	0.76	-0.1
77,966	-		Dshi_4009	0.77	-0.7
77,967	+		Dshi_4009	0.77	-0.1
77,971	-		Dshi_4009	0.78	+0.5
77,976	-		Dshi_4009	0.78	-0.5
77,977	+		Dshi_4009	0.78	+0.3
77,985	-		Dshi_4009	0.79	-0.2
77,995	+		Dshi_4009	0.80	+0.2
77,995	+		Dshi_4009	0.80	-0.0
78,010	-		Dshi_4009	0.82	-0.1
78,010	-		Dshi_4009	0.82	+0.2
78,025	-		Dshi_4009	0.84	-0.0
78,025	-		Dshi_4009	0.84	-0.1
78,025	-		Dshi_4009	0.84	+0.0
78,029	+		Dshi_4009	0.84	-0.3
78,031	+		Dshi_4009	0.85	+0.1
78,039	-		Dshi_4009	0.85	-0.2
78,039	-		Dshi_4009	0.85	-0.1
78,044	-		Dshi_4009	0.86	-0.3
78,044	-		Dshi_4009	0.86	-0.4
78,071	+		Dshi_4009	0.89	-0.5
78,072	+		Dshi_4009	0.89	+0.1
78,079	-				-0.2
78,171	+				-0.3
78,179	-				-0.0
78,179	-				+0.1
78,179	-				-0.1
78,185	-				+0.3
78,193	+				+0.3
78,193	+				-0.2
78,199	+				+0.3
78,200	+				-0.0
78,206	-				+0.1
78,211	+				-0.4
78,211	+				+0.1
78,214	-				-0.2
78,235	+				+0.0
78,235	+				-0.1
78,243	-				-1.1
78,256	-				-0.4
78,266	+				+0.1
78,267	+				-0.6
78,267	+				-0.2
78,278	+				-0.0
78,293	+				-0.9
78,296	-				+0.1
78,310	-				-0.7
78,314	-				-1.4
78,358	-				-0.4
78,361	+				+1.4
78,361	+				-0.4
78,364	+				-0.3
78,366	+				-1.0
78,369	+				+0.0
78,369	-				-0.0
78,378	+				-0.1
78,378	-				+0.2
78,383	+				-0.3
78,383	+				-0.0
78,383	-				+0.5
78,391	-				-0.4
78,393	-		Dshi_4010	0.10	+0.6
78,393	-		Dshi_4010	0.10	+0.4
78,416	-		Dshi_4010	0.13	+1.1
78,421	+		Dshi_4010	0.14	-0.1
78,422	+		Dshi_4010	0.14	-0.2
78,423	-		Dshi_4010	0.14	+0.3
78,423	-		Dshi_4010	0.14	-0.3
78,427	+		Dshi_4010	0.15	-0.6
78,434	+		Dshi_4010	0.16	-0.1
78,444	+		Dshi_4010	0.17	+0.2
78,448	-		Dshi_4010	0.18	+0.9
78,448	-		Dshi_4010	0.18	+0.9
78,453	-		Dshi_4010	0.18	-0.3
78,453	-		Dshi_4010	0.18	-0.2
78,477	-		Dshi_4010	0.22	-0.1
78,504	-		Dshi_4010	0.26	-0.3
78,504	-		Dshi_4010	0.26	+0.3
78,504	-		Dshi_4010	0.26	-0.1
78,508	-		Dshi_4010	0.26	+0.4
78,514	+		Dshi_4010	0.27	-0.6
78,522	-		Dshi_4010	0.28	+0.2
78,522	-		Dshi_4010	0.28	+0.1
78,522	-		Dshi_4010	0.28	+0.2
78,524	+		Dshi_4010	0.28	+0.4
78,541	-		Dshi_4010	0.31	-0.2
78,614	+		Dshi_4010	0.41	-0.7
78,640	+		Dshi_4010	0.44	-0.0
78,640	+		Dshi_4010	0.44	-0.5
78,649	+		Dshi_4010	0.46	-0.4
78,650	+		Dshi_4010	0.46	-0.3
78,651	+		Dshi_4010	0.46	-0.6
78,663	-		Dshi_4010	0.48	+1.3
78,692	-		Dshi_4010	0.52	+1.2
78,721	+		Dshi_4010	0.56	+0.3
78,724	-		Dshi_4010	0.56	-0.3
78,729	-		Dshi_4010	0.57	+0.3
78,753	-		Dshi_4010	0.60	+0.0
78,756	+		Dshi_4010	0.61	+0.3
78,761	+		Dshi_4010	0.61	+0.2
78,761	+		Dshi_4010	0.61	+0.6
78,761	+		Dshi_4010	0.61	+0.4
78,766	+		Dshi_4010	0.62	-0.6
78,769	-		Dshi_4010	0.62	+0.3
78,788	+		Dshi_4010	0.65	-0.6
78,804	-		Dshi_4010	0.67	+0.8
78,806	+		Dshi_4010	0.68	-1.0
78,814	-		Dshi_4010	0.69	-0.0
78,825	-		Dshi_4010	0.70	-0.4
78,841	+		Dshi_4010	0.72	-0.4
78,841	+		Dshi_4010	0.72	-1.0
78,849	-		Dshi_4010	0.73	-0.2
78,849	-		Dshi_4010	0.73	-1.8
78,849	-		Dshi_4010	0.73	-0.3
78,851	+		Dshi_4010	0.74	+0.6
78,946	+		Dshi_4010	0.87	+1.3
78,985	+				+0.0
79,001	-				-0.5
79,005	-				+0.1
79,046	-				-0.2
79,048	+				-0.0
79,048	+				-0.2
79,052	+				-0.2
79,052	+				+0.1
79,053	+				-0.3
79,053	+				-0.4
79,077	-				-0.4
79,106	-				-0.2
79,117	-				+0.3
79,121	-				+0.3
79,141	+				-0.8
79,153	+				+0.2
79,159	+				+0.0
79,161	+				+0.8