Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2673

Experiment: m.b. Spectinomycin 0.0015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.0015 mg/ml
2,827,783	+		Dshi_2671	0.89	+0.6
2,827,867	+				+0.4
2,827,874	+				-0.5
2,827,895	-				-0.9
2,827,917	+				-0.6
2,827,935	+				+0.3
2,827,944	-				-0.7
2,827,968	+				-0.1
2,828,014	-				-0.2
2,828,031	+				-0.3
2,828,039	-				-0.7
2,828,088	+				-0.1
2,828,088	+				-0.4
2,828,096	-				-0.2
2,828,108	+		Dshi_2672	0.10	+0.8
2,828,174	+		Dshi_2672	0.26	-0.8
2,828,182	-		Dshi_2672	0.28	+0.7
2,828,326	+		Dshi_2672	0.62	-0.4
2,828,402	+		Dshi_2672	0.80	+0.3
2,828,405	+		Dshi_2672	0.81	+0.2
2,828,420	-		Dshi_2672	0.85	+0.1
2,828,519	-				-0.0
2,828,576	+				-1.1
2,828,581	+				+0.8
2,828,594	+				-0.5
2,828,631	-				-0.7
2,828,720	+				+0.1
2,828,720	+				-0.1
2,828,720	+				-0.1
2,828,720	+				-0.5
2,828,728	-				-0.0
2,828,728	-				-0.3
2,828,729	+				+0.2
2,828,757	+				-0.4
2,828,757	+				-0.3
2,828,821	+				+0.9
2,828,853	+				+0.1
2,828,861	-				-0.5
2,828,867	-				-1.0
2,828,961	+		Dshi_2673	0.10	-0.1
2,828,986	+		Dshi_2673	0.12	-0.1
2,829,046	+		Dshi_2673	0.15	-1.1
2,829,056	-		Dshi_2673	0.16	-0.5
2,829,071	-		Dshi_2673	0.16	+0.2
2,829,154	+		Dshi_2673	0.21	+0.7
2,829,154	+		Dshi_2673	0.21	+0.0
2,829,157	-		Dshi_2673	0.21	-0.2
2,829,162	-		Dshi_2673	0.22	-1.9
2,829,162	-		Dshi_2673	0.22	-1.1
2,829,266	-		Dshi_2673	0.27	-0.1
2,829,290	+		Dshi_2673	0.29	-0.3
2,829,291	+		Dshi_2673	0.29	-0.7
2,829,555	-		Dshi_2673	0.44	-0.8
2,829,597	+		Dshi_2673	0.46	+0.2
2,829,605	-		Dshi_2673	0.47	+0.5
2,829,724	+		Dshi_2673	0.53	-0.1
2,829,743	-		Dshi_2673	0.54	-0.5
2,829,884	+		Dshi_2673	0.62	-0.1
2,829,887	-		Dshi_2673	0.63	-0.3
2,829,894	+		Dshi_2673	0.63	-0.5
2,829,918	+		Dshi_2673	0.64	-0.7
2,830,272	+		Dshi_2673	0.84	+0.6
2,830,286	-		Dshi_2673	0.85	-0.2
2,830,294	+		Dshi_2673	0.86	-1.1
2,830,426	+				+0.4
2,830,494	-				-0.3
2,830,634	-				+0.4
2,830,764	-				-0.2
2,830,973	+				+0.6
2,830,981	-		Dshi_2674	0.11	-0.1
2,831,141	+		Dshi_2674	0.34	+0.0
2,831,147	-		Dshi_2674	0.35	-0.3
2,831,289	+		Dshi_2674	0.56	-1.0
2,831,297	-		Dshi_2674	0.57	-0.1
2,831,297	-		Dshi_2674	0.57	-1.3
2,831,345	+		Dshi_2674	0.64	+0.4
2,831,359	-		Dshi_2674	0.66	+0.8
2,831,373	-		Dshi_2674	0.68	+0.1
2,831,440	+		Dshi_2674	0.78	+0.2
2,831,447	-		Dshi_2674	0.79	+0.7
2,831,516	-		Dshi_2674	0.89	-1.1