Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1562
Experiment: m.b. Spectinomycin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Spectinomycin 0.0015 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,625,370 | - | Dshi_1561 | 0.85 | -0.4 | |
| 1,625,370 | - | Dshi_1561 | 0.85 | +0.5 | |
| 1,625,607 | + | -0.5 | |||
| 1,625,838 | + | -0.6 | |||
| 1,625,915 | + | -0.3 | |||
| 1,625,985 | + | -0.1 | |||
| 1,626,139 | + | -0.2 | |||
| 1,626,383 | - | Dshi_1562 | 0.18 | -0.8 | |
| 1,626,468 | - | Dshi_1562 | 0.34 | -1.4 | |
| 1,626,561 | + | Dshi_1562 | 0.51 | -1.6 | |
| 1,626,584 | - | Dshi_1562 | 0.55 | -0.3 | |
| 1,626,592 | + | Dshi_1562 | 0.57 | -0.6 | |
| 1,626,592 | + | Dshi_1562 | 0.57 | -1.1 | |
| 1,626,629 | - | Dshi_1562 | 0.64 | +1.0 | |
| 1,626,659 | - | Dshi_1562 | 0.69 | -2.2 | |
| 1,626,684 | + | Dshi_1562 | 0.74 | -0.9 | |
| 1,626,732 | + | Dshi_1562 | 0.83 | -0.2 | |
| 1,626,886 | - | -0.3 |
Or see this region's nucleotide sequence