Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_06365

Experiment: L-Glutamic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_06363 and H281DRAFT_06364 are separated by 39 nucleotidesH281DRAFT_06364 and H281DRAFT_06365 are separated by 78 nucleotidesH281DRAFT_06365 and H281DRAFT_06366 are separated by 21 nucleotidesH281DRAFT_06366 and H281DRAFT_06367 are separated by 72 nucleotides H281DRAFT_06363: H281DRAFT_06363 - hypothetical protein, at 34,634 to 36,019 _06363 H281DRAFT_06364: H281DRAFT_06364 - pilus assembly protein CpaB, at 36,059 to 36,895 _06364 H281DRAFT_06365: H281DRAFT_06365 - pilus assembly protein CpaC, at 36,974 to 38,701 _06365 H281DRAFT_06366: H281DRAFT_06366 - hypothetical protein, at 38,723 to 39,073 _06366 H281DRAFT_06367: H281DRAFT_06367 - pilus assembly protein CpaE, at 39,146 to 40,357 _06367 Position (kb) 36 37 38 39Strain fitness (log2 ratio) -1 0 1at 37.716 kb on + strand, within H281DRAFT_06365at 38.079 kb on + strand, within H281DRAFT_06365

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (C)
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37,716 + H281DRAFT_06365 0.43 +0.4
38,079 + H281DRAFT_06365 0.64 +0.8

Or see this region's nucleotide sequence