Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04968

Experiment: L-Glutamic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04966 and H281DRAFT_04967 are separated by 85 nucleotidesH281DRAFT_04967 and H281DRAFT_04968 are separated by 227 nucleotidesH281DRAFT_04968 and H281DRAFT_04969 are separated by 312 nucleotides H281DRAFT_04966: H281DRAFT_04966 - putative redox protein, at 150,342 to 150,740 _04966 H281DRAFT_04967: H281DRAFT_04967 - protein of unknown function (DUF1857), at 150,826 to 151,308 _04967 H281DRAFT_04968: H281DRAFT_04968 - Hemin uptake protein hemP, at 151,536 to 151,799 _04968 H281DRAFT_04969: H281DRAFT_04969 - 4Fe-4S binding domain-containing protein, at 152,112 to 153,518 _04969 Position (kb) 151 152Strain fitness (log2 ratio) -1 0 1at 150.811 kb on + strandat 150.844 kb on - strandat 150.844 kb on - strandat 150.987 kb on + strand, within H281DRAFT_04967at 150.988 kb on - strand, within H281DRAFT_04967at 151.090 kb on + strand, within H281DRAFT_04967at 151.090 kb on + strand, within H281DRAFT_04967at 151.090 kb on + strand, within H281DRAFT_04967at 151.090 kb on + strand, within H281DRAFT_04967at 151.090 kb on + strand, within H281DRAFT_04967at 151.091 kb on - strand, within H281DRAFT_04967at 151.159 kb on + strand, within H281DRAFT_04967at 151.248 kb on + strand, within H281DRAFT_04967at 151.270 kb on + strandat 151.270 kb on + strandat 151.270 kb on + strandat 151.271 kb on - strandat 151.271 kb on - strandat 151.271 kb on - strandat 151.326 kb on + strandat 151.327 kb on - strandat 151.327 kb on - strandat 151.718 kb on + strand, within H281DRAFT_04968at 151.752 kb on + strand, within H281DRAFT_04968at 151.752 kb on + strand, within H281DRAFT_04968at 151.798 kb on - strandat 151.798 kb on - strandat 151.855 kb on + strandat 151.863 kb on - strandat 151.894 kb on - strandat 151.976 kb on - strandat 152.009 kb on + strandat 152.040 kb on - strandat 152.072 kb on - strandat 152.072 kb on - strandat 152.095 kb on + strandat 152.096 kb on - strandat 152.221 kb on + strandat 152.557 kb on + strand, within H281DRAFT_04969at 152.707 kb on + strand, within H281DRAFT_04969

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (C)
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150,811 + +0.7
150,844 - +0.7
150,844 - +0.1
150,987 + H281DRAFT_04967 0.33 -0.7
150,988 - H281DRAFT_04967 0.34 -0.0
151,090 + H281DRAFT_04967 0.55 -1.0
151,090 + H281DRAFT_04967 0.55 +0.4
151,090 + H281DRAFT_04967 0.55 +0.2
151,090 + H281DRAFT_04967 0.55 -0.3
151,090 + H281DRAFT_04967 0.55 -1.0
151,091 - H281DRAFT_04967 0.55 -0.1
151,159 + H281DRAFT_04967 0.69 +0.1
151,248 + H281DRAFT_04967 0.87 +0.3
151,270 + -0.4
151,270 + -0.3
151,270 + -0.0
151,271 - +0.3
151,271 - +0.3
151,271 - +0.2
151,326 + +0.0
151,327 - +0.6
151,327 - +0.8
151,718 + H281DRAFT_04968 0.69 +0.4
151,752 + H281DRAFT_04968 0.82 +0.7
151,752 + H281DRAFT_04968 0.82 +0.7
151,798 - +0.5
151,798 - +0.9
151,855 + +0.4
151,863 - +1.1
151,894 - -0.3
151,976 - +0.4
152,009 + -0.2
152,040 - -0.2
152,072 - -0.2
152,072 - -0.3
152,095 + +0.4
152,096 - -0.3
152,221 + -0.3
152,557 + H281DRAFT_04969 0.32 +0.0
152,707 + H281DRAFT_04969 0.42 -0.0

Or see this region's nucleotide sequence