Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04767 and H281DRAFT_04768 are separated by 123 nucleotides H281DRAFT_04768 and H281DRAFT_04769 are separated by 73 nucleotides H281DRAFT_04769 and H281DRAFT_04770 are separated by 126 nucleotides
H281DRAFT_04767: H281DRAFT_04767 - GlcNAc-PI de-N-acetylase, at 183,768 to 186,164
_04767
H281DRAFT_04768: H281DRAFT_04768 - colanic acid biosynthesis protein WcaH, at 186,288 to 186,740
_04768
H281DRAFT_04769: H281DRAFT_04769 - hypothetical protein, at 186,814 to 186,963
_04769
H281DRAFT_04770: H281DRAFT_04770 - hypothetical protein, at 187,090 to 189,090
_04770
Position (kb) 186
187 Strain fitness (log2 ratio) -1
0
1 at 185.581 kb on + strand, within H281DRAFT_04767 at 185.592 kb on - strand, within H281DRAFT_04767 at 185.951 kb on + strand at 185.951 kb on + strand at 186.094 kb on - strand at 186.198 kb on + strand at 186.274 kb on - strand at 186.298 kb on + strand at 186.299 kb on - strand at 186.419 kb on - strand, within H281DRAFT_04768 at 186.475 kb on + strand, within H281DRAFT_04768 at 187.000 kb on + strand at 187.028 kb on + strand at 187.028 kb on + strand at 187.091 kb on + strand at 187.103 kb on + strand at 187.515 kb on - strand at 187.595 kb on + strand, within H281DRAFT_04770 at 187.595 kb on + strand, within H281DRAFT_04770 at 187.661 kb on + strand, within H281DRAFT_04770 at 187.661 kb on + strand, within H281DRAFT_04770 at 187.661 kb on + strand, within H281DRAFT_04770 at 187.682 kb on + strand, within H281DRAFT_04770 at 187.682 kb on + strand, within H281DRAFT_04770 at 187.690 kb on - strand, within H281DRAFT_04770
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 185,581 + H281DRAFT_04767 0.76 +0.0 185,592 - H281DRAFT_04767 0.76 -1.0 185,951 + +0.3 185,951 + +0.0 186,094 - +0.4 186,198 + +1.5 186,274 - +0.2 186,298 + -0.8 186,299 - +0.1 186,419 - H281DRAFT_04768 0.29 +1.1 186,475 + H281DRAFT_04768 0.41 +0.3 187,000 + +0.9 187,028 + +1.3 187,028 + +0.7 187,091 + +0.2 187,103 + +0.5 187,515 - +0.7 187,595 + H281DRAFT_04770 0.25 +0.1 187,595 + H281DRAFT_04770 0.25 -0.0 187,661 + H281DRAFT_04770 0.29 -0.2 187,661 + H281DRAFT_04770 0.29 -0.5 187,661 + H281DRAFT_04770 0.29 +0.5 187,682 + H281DRAFT_04770 0.30 -0.9 187,682 + H281DRAFT_04770 0.30 -0.3 187,690 - H281DRAFT_04770 0.30 +0.2
Or see this region's nucleotide sequence