Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04651 and H281DRAFT_04652 are separated by 70 nucleotides H281DRAFT_04652 and H281DRAFT_04653 are separated by 292 nucleotides
H281DRAFT_04651: H281DRAFT_04651 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, at 52,852 to 53,997
_04651
H281DRAFT_04652: H281DRAFT_04652 - ADP-ribose pyrophosphatase YjhB, NUDIX family, at 54,068 to 54,547
_04652
H281DRAFT_04653: H281DRAFT_04653 - NAD(P) transhydrogenase subunit alpha, at 54,840 to 55,982
_04653
Position (kb) 54
55 Strain fitness (log2 ratio) -1
0
1 at 53.998 kb on - strand at 54.060 kb on - strand at 54.095 kb on - strand at 54.095 kb on - strand at 54.095 kb on - strand at 54.095 kb on - strand at 54.095 kb on - strand at 54.274 kb on - strand, within H281DRAFT_04652 at 54.289 kb on - strand, within H281DRAFT_04652 at 54.331 kb on - strand, within H281DRAFT_04652 at 54.331 kb on - strand, within H281DRAFT_04652 at 54.331 kb on - strand, within H281DRAFT_04652 at 54.568 kb on - strand at 54.821 kb on - strand at 54.821 kb on - strand at 54.916 kb on - strand at 54.916 kb on - strand at 55.145 kb on - strand, within H281DRAFT_04653 at 55.252 kb on - strand, within H281DRAFT_04653 at 55.281 kb on + strand, within H281DRAFT_04653 at 55.483 kb on - strand, within H281DRAFT_04653
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 53,998 - -0.3 54,060 - -0.8 54,095 - +0.1 54,095 - +0.1 54,095 - +0.6 54,095 - -1.7 54,095 - +0.8 54,274 - H281DRAFT_04652 0.43 +1.1 54,289 - H281DRAFT_04652 0.46 +0.3 54,331 - H281DRAFT_04652 0.55 +1.2 54,331 - H281DRAFT_04652 0.55 -0.6 54,331 - H281DRAFT_04652 0.55 +0.3 54,568 - +0.0 54,821 - +0.4 54,821 - +0.0 54,916 - +0.3 54,916 - -0.3 55,145 - H281DRAFT_04653 0.27 +0.2 55,252 - H281DRAFT_04653 0.36 -0.8 55,281 + H281DRAFT_04653 0.39 -1.3 55,483 - H281DRAFT_04653 0.56 -1.1
Or see this region's nucleotide sequence