Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04263

Experiment: L-Glutamic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04262 and H281DRAFT_04263 are separated by 626 nucleotides H281DRAFT_04262: H281DRAFT_04262 - LSU ribosomal protein L13P, at 380,131 to 380,559 _04262 H281DRAFT_04263: H281DRAFT_04263 - putative redox protein, at 381,186 to 381,608 _04263 Position (kb) 381 382Strain fitness (log2 ratio) -2 -1 0 1at 380.869 kb on + strandat 380.869 kb on + strandat 380.869 kb on + strandat 380.869 kb on + strandat 380.870 kb on - strandat 380.871 kb on + strandat 380.871 kb on + strandat 380.872 kb on - strandat 380.966 kb on - strandat 380.966 kb on - strandat 380.969 kb on + strandat 380.969 kb on + strandat 380.969 kb on + strandat 380.970 kb on - strandat 380.970 kb on - strandat 380.970 kb on - strandat 380.970 kb on - strandat 380.985 kb on - strandat 381.015 kb on + strandat 381.020 kb on + strandat 381.099 kb on + strandat 381.144 kb on + strandat 381.145 kb on - strandat 381.145 kb on - strandat 381.162 kb on + strandat 381.163 kb on - strandat 381.163 kb on - strandat 381.180 kb on + strandat 381.180 kb on + strandat 381.181 kb on - strandat 381.181 kb on - strandat 381.181 kb on - strandat 381.351 kb on + strand, within H281DRAFT_04263at 381.352 kb on - strandat 381.537 kb on + strand, within H281DRAFT_04263at 381.537 kb on + strand, within H281DRAFT_04263at 381.537 kb on + strand, within H281DRAFT_04263at 381.537 kb on + strand, within H281DRAFT_04263at 381.538 kb on - strand, within H281DRAFT_04263at 381.538 kb on - strand, within H281DRAFT_04263at 381.538 kb on - strand, within H281DRAFT_04263at 381.712 kb on + strandat 382.148 kb on - strandat 382.176 kb on - strandat 382.176 kb on - strandat 382.191 kb on + strandat 382.192 kb on - strandat 382.347 kb on + strandat 382.358 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (C)
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380,869 + +0.3
380,869 + -0.4
380,869 + -1.0
380,869 + -1.8
380,870 - +0.3
380,871 + +0.3
380,871 + -0.2
380,872 - -0.5
380,966 - +0.4
380,966 - -0.3
380,969 + +0.1
380,969 + +0.2
380,969 + -1.6
380,970 - +0.6
380,970 - +0.3
380,970 - -0.4
380,970 - +1.1
380,985 - +0.1
381,015 + -0.2
381,020 + -0.0
381,099 + +0.7
381,144 + +0.4
381,145 - +0.2
381,145 - -0.2
381,162 + +0.1
381,163 - -0.6
381,163 - -1.1
381,180 + +0.5
381,180 + -0.3
381,181 - -0.3
381,181 - +0.2
381,181 - -0.8
381,351 + H281DRAFT_04263 0.39 -0.5
381,352 - +0.8
381,537 + H281DRAFT_04263 0.83 -0.5
381,537 + H281DRAFT_04263 0.83 -0.3
381,537 + H281DRAFT_04263 0.83 -0.8
381,537 + H281DRAFT_04263 0.83 -0.9
381,538 - H281DRAFT_04263 0.83 -0.7
381,538 - H281DRAFT_04263 0.83 -0.9
381,538 - H281DRAFT_04263 0.83 -0.3
381,712 + +0.2
382,148 - +0.5
382,176 - +1.2
382,176 - +0.1
382,191 + -0.0
382,192 - +0.2
382,347 + -0.5
382,358 + -0.1

Or see this region's nucleotide sequence