Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02633 and H281DRAFT_02634 overlap by 4 nucleotides H281DRAFT_02634 and H281DRAFT_02635 are separated by 87 nucleotides H281DRAFT_02635 and H281DRAFT_02636 are separated by 85 nucleotides H281DRAFT_02636 and H281DRAFT_02637 overlap by 4 nucleotides
H281DRAFT_02633: H281DRAFT_02633 - beta-galactosidase, at 209,094 to 211,067
_02633
H281DRAFT_02634: H281DRAFT_02634 - Beta-galactosidase, at 211,064 to 213,598
_02634
H281DRAFT_02635: H281DRAFT_02635 - hypothetical protein, at 213,686 to 214,093
_02635
H281DRAFT_02636: H281DRAFT_02636 - hypothetical protein, at 214,179 to 214,472
_02636
H281DRAFT_02637: H281DRAFT_02637 - Outer membrane protein TolC, at 214,469 to 215,959
_02637
Position (kb) 211
212
213
214 Strain fitness (log2 ratio) -1
0
1 at 210.111 kb on + strand, within H281DRAFT_02633 at 210.148 kb on - strand, within H281DRAFT_02633 at 210.414 kb on + strand, within H281DRAFT_02633 at 211.026 kb on - strand at 211.205 kb on - strand at 211.379 kb on + strand, within H281DRAFT_02634 at 211.595 kb on + strand, within H281DRAFT_02634 at 211.596 kb on - strand at 212.123 kb on + strand, within H281DRAFT_02634 at 212.124 kb on - strand, within H281DRAFT_02634 at 212.124 kb on - strand, within H281DRAFT_02634 at 212.217 kb on - strand, within H281DRAFT_02634 at 212.288 kb on + strand, within H281DRAFT_02634 at 212.333 kb on + strand, within H281DRAFT_02634 at 212.334 kb on - strand, within H281DRAFT_02634 at 212.334 kb on - strand, within H281DRAFT_02634 at 213.369 kb on - strand at 213.405 kb on + strand at 213.644 kb on + strand at 213.669 kb on - strand at 213.690 kb on + strand at 213.691 kb on - strand at 213.691 kb on - strand at 214.242 kb on - strand, within H281DRAFT_02636 at 214.361 kb on - strand, within H281DRAFT_02636
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 210,111 + H281DRAFT_02633 0.52 +0.3 210,148 - H281DRAFT_02633 0.53 +0.4 210,414 + H281DRAFT_02633 0.67 +0.3 211,026 - +0.4 211,205 - -0.2 211,379 + H281DRAFT_02634 0.12 +1.0 211,595 + H281DRAFT_02634 0.21 +0.5 211,596 - +0.2 212,123 + H281DRAFT_02634 0.42 +1.3 212,124 - H281DRAFT_02634 0.42 +0.5 212,124 - H281DRAFT_02634 0.42 +0.3 212,217 - H281DRAFT_02634 0.45 +0.3 212,288 + H281DRAFT_02634 0.48 -0.4 212,333 + H281DRAFT_02634 0.50 +0.2 212,334 - H281DRAFT_02634 0.50 +0.7 212,334 - H281DRAFT_02634 0.50 +1.1 213,369 - -0.2 213,405 + +0.2 213,644 + -0.3 213,669 - -0.2 213,690 + -0.1 213,691 - +0.3 213,691 - -0.4 214,242 - H281DRAFT_02636 0.21 +0.4 214,361 - H281DRAFT_02636 0.62 -0.8
Or see this region's nucleotide sequence