Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02589 and H281DRAFT_02590 overlap by 41 nucleotides H281DRAFT_02590 and H281DRAFT_02591 are separated by 97 nucleotides H281DRAFT_02591 and H281DRAFT_02592 are separated by 216 nucleotides H281DRAFT_02592 and H281DRAFT_02593 are separated by 146 nucleotides
H281DRAFT_02589: H281DRAFT_02589 - hypothetical protein, at 163,449 to 164,057
_02589
H281DRAFT_02590: H281DRAFT_02590 - Quinol monooxygenase YgiN, at 164,017 to 164,319
_02590
H281DRAFT_02591: H281DRAFT_02591 - hypothetical protein, at 164,417 to 164,521
_02591
H281DRAFT_02592: H281DRAFT_02592 - fumarase, class II, at 164,738 to 166,126
_02592
H281DRAFT_02593: H281DRAFT_02593 - aerobic C4-dicarboxylate transport protein, at 166,273 to 167,661
_02593
Position (kb) 164
165
166
167 Strain fitness (log2 ratio) -2
-1
0
1 at 163.920 kb on + strand, within H281DRAFT_02589 at 164.041 kb on + strand at 164.367 kb on + strand at 164.367 kb on + strand at 164.368 kb on - strand at 164.368 kb on - strand at 164.448 kb on - strand, within H281DRAFT_02591 at 164.448 kb on - strand, within H281DRAFT_02591 at 164.449 kb on + strand, within H281DRAFT_02591 at 164.450 kb on - strand, within H281DRAFT_02591 at 164.562 kb on + strand at 164.740 kb on - strand at 165.030 kb on + strand, within H281DRAFT_02592 at 165.290 kb on + strand, within H281DRAFT_02592 at 165.635 kb on + strand, within H281DRAFT_02592 at 166.085 kb on - strand at 166.411 kb on + strand at 166.661 kb on - strand, within H281DRAFT_02593 at 166.668 kb on - strand, within H281DRAFT_02593
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 163,920 + H281DRAFT_02589 0.77 -0.6 164,041 + -0.7 164,367 + +0.3 164,367 + +0.7 164,368 - -0.8 164,368 - +0.6 164,448 - H281DRAFT_02591 0.30 -0.2 164,448 - H281DRAFT_02591 0.30 +0.8 164,449 + H281DRAFT_02591 0.30 +0.4 164,450 - H281DRAFT_02591 0.31 -0.2 164,562 + +0.2 164,740 - -0.1 165,030 + H281DRAFT_02592 0.21 +0.9 165,290 + H281DRAFT_02592 0.40 +0.3 165,635 + H281DRAFT_02592 0.65 +0.6 166,085 - -0.2 166,411 + -1.8 166,661 - H281DRAFT_02593 0.28 -0.7 166,668 - H281DRAFT_02593 0.28 +0.8
Or see this region's nucleotide sequence