Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02402 and H281DRAFT_02403 are separated by 386 nucleotides H281DRAFT_02403 and H281DRAFT_02404 are separated by 303 nucleotides H281DRAFT_02404 and H281DRAFT_02405 are separated by 169 nucleotides
H281DRAFT_02402: H281DRAFT_02402 - replication restart DNA helicase PriA, at 567,691 to 569,937
_02402
H281DRAFT_02403: H281DRAFT_02403 - hypothetical protein, at 570,324 to 570,494
_02403
H281DRAFT_02404: H281DRAFT_02404 - L-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase, at 570,798 to 574,736
_02404
H281DRAFT_02405: H281DRAFT_02405 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 574,906 to 576,054
_02405
Position (kb) 570
571
572
573
574
575 Strain fitness (log2 ratio) -1
0
1
2 at 569.932 kb on - strand at 569.996 kb on - strand at 570.046 kb on + strand at 570.046 kb on + strand at 570.046 kb on + strand at 570.046 kb on + strand at 570.047 kb on - strand at 570.047 kb on - strand at 570.047 kb on - strand at 570.047 kb on - strand at 570.163 kb on + strand at 570.163 kb on + strand at 570.164 kb on - strand at 570.432 kb on - strand, within H281DRAFT_02403 at 570.474 kb on + strand, within H281DRAFT_02403 at 570.475 kb on - strand, within H281DRAFT_02403 at 570.548 kb on + strand at 570.549 kb on - strand at 570.549 kb on - strand at 570.558 kb on - strand at 570.558 kb on - strand at 570.559 kb on + strand at 570.619 kb on - strand at 571.218 kb on - strand, within H281DRAFT_02404 at 571.218 kb on - strand, within H281DRAFT_02404 at 571.218 kb on - strand, within H281DRAFT_02404 at 571.218 kb on - strand, within H281DRAFT_02404 at 571.611 kb on + strand, within H281DRAFT_02404 at 571.633 kb on - strand, within H281DRAFT_02404 at 571.686 kb on + strand, within H281DRAFT_02404 at 571.686 kb on + strand, within H281DRAFT_02404 at 571.689 kb on + strand, within H281DRAFT_02404 at 571.689 kb on + strand, within H281DRAFT_02404 at 571.689 kb on + strand, within H281DRAFT_02404 at 571.698 kb on + strand, within H281DRAFT_02404 at 571.698 kb on + strand, within H281DRAFT_02404 at 571.699 kb on - strand, within H281DRAFT_02404 at 571.750 kb on - strand, within H281DRAFT_02404 at 571.750 kb on - strand, within H281DRAFT_02404 at 571.750 kb on - strand, within H281DRAFT_02404 at 571.750 kb on - strand, within H281DRAFT_02404 at 571.876 kb on - strand, within H281DRAFT_02404 at 572.034 kb on + strand, within H281DRAFT_02404 at 572.034 kb on + strand, within H281DRAFT_02404 at 572.035 kb on - strand, within H281DRAFT_02404 at 572.035 kb on - strand, within H281DRAFT_02404 at 572.097 kb on + strand, within H281DRAFT_02404 at 572.098 kb on - strand, within H281DRAFT_02404 at 572.169 kb on + strand, within H281DRAFT_02404 at 572.169 kb on + strand, within H281DRAFT_02404 at 572.170 kb on - strand, within H281DRAFT_02404 at 572.170 kb on - strand, within H281DRAFT_02404 at 572.171 kb on + strand, within H281DRAFT_02404 at 572.184 kb on + strand, within H281DRAFT_02404 at 572.274 kb on + strand, within H281DRAFT_02404 at 572.274 kb on + strand, within H281DRAFT_02404 at 572.275 kb on - strand at 572.295 kb on + strand, within H281DRAFT_02404 at 572.295 kb on + strand, within H281DRAFT_02404 at 572.296 kb on - strand, within H281DRAFT_02404 at 572.296 kb on - strand, within H281DRAFT_02404 at 572.296 kb on - strand, within H281DRAFT_02404 at 572.296 kb on - strand, within H281DRAFT_02404 at 572.296 kb on - strand, within H281DRAFT_02404 at 572.296 kb on - strand, within H281DRAFT_02404 at 572.310 kb on + strand, within H281DRAFT_02404 at 572.311 kb on - strand, within H281DRAFT_02404 at 572.406 kb on + strand, within H281DRAFT_02404 at 572.406 kb on + strand, within H281DRAFT_02404 at 572.406 kb on + strand, within H281DRAFT_02404 at 572.407 kb on - strand, within H281DRAFT_02404 at 572.442 kb on + strand, within H281DRAFT_02404 at 572.443 kb on - strand, within H281DRAFT_02404 at 572.887 kb on + strand, within H281DRAFT_02404 at 572.945 kb on + strand, within H281DRAFT_02404 at 572.945 kb on + strand, within H281DRAFT_02404 at 572.946 kb on - strand, within H281DRAFT_02404 at 572.946 kb on - strand, within H281DRAFT_02404 at 572.946 kb on - strand, within H281DRAFT_02404 at 572.946 kb on - strand, within H281DRAFT_02404 at 572.946 kb on - strand, within H281DRAFT_02404 at 573.036 kb on + strand, within H281DRAFT_02404 at 573.037 kb on - strand, within H281DRAFT_02404 at 573.101 kb on + strand, within H281DRAFT_02404 at 573.102 kb on - strand, within H281DRAFT_02404 at 573.102 kb on - strand, within H281DRAFT_02404 at 573.102 kb on - strand, within H281DRAFT_02404 at 573.849 kb on + strand, within H281DRAFT_02404 at 573.923 kb on + strand, within H281DRAFT_02404 at 573.981 kb on + strand, within H281DRAFT_02404 at 573.982 kb on - strand, within H281DRAFT_02404 at 574.077 kb on + strand, within H281DRAFT_02404 at 574.077 kb on + strand, within H281DRAFT_02404 at 574.078 kb on - strand, within H281DRAFT_02404 at 574.144 kb on + strand, within H281DRAFT_02404 at 574.144 kb on + strand, within H281DRAFT_02404 at 574.144 kb on + strand, within H281DRAFT_02404 at 574.144 kb on + strand, within H281DRAFT_02404 at 574.145 kb on - strand, within H281DRAFT_02404 at 574.145 kb on - strand, within H281DRAFT_02404 at 574.145 kb on - strand, within H281DRAFT_02404 at 574.145 kb on - strand, within H281DRAFT_02404 at 574.145 kb on - strand, within H281DRAFT_02404 at 574.145 kb on - strand, within H281DRAFT_02404 at 574.150 kb on + strand, within H281DRAFT_02404 at 574.151 kb on - strand, within H281DRAFT_02404 at 574.268 kb on + strand, within H281DRAFT_02404 at 574.268 kb on + strand, within H281DRAFT_02404 at 574.269 kb on - strand, within H281DRAFT_02404 at 574.323 kb on + strand, within H281DRAFT_02404 at 574.324 kb on - strand, within H281DRAFT_02404 at 574.324 kb on - strand, within H281DRAFT_02404 at 574.324 kb on - strand, within H281DRAFT_02404 at 574.324 kb on - strand, within H281DRAFT_02404 at 574.356 kb on - strand at 574.482 kb on + strand at 574.482 kb on + strand at 574.647 kb on + strand at 574.709 kb on + strand at 574.709 kb on + strand at 574.840 kb on + strand at 574.840 kb on + strand at 574.841 kb on - strand at 574.905 kb on + strand at 574.905 kb on + strand at 574.905 kb on + strand at 574.906 kb on - strand at 574.987 kb on - strand at 574.987 kb on - strand at 574.987 kb on - strand at 574.997 kb on + strand at 574.997 kb on + strand at 575.263 kb on + strand, within H281DRAFT_02405 at 575.263 kb on + strand at 575.263 kb on + strand, within H281DRAFT_02405 at 575.311 kb on + strand, within H281DRAFT_02405 at 575.444 kb on - strand, within H281DRAFT_02405 at 575.444 kb on - strand, within H281DRAFT_02405 at 575.515 kb on + strand, within H281DRAFT_02405 at 575.515 kb on + strand, within H281DRAFT_02405 at 575.516 kb on - strand, within H281DRAFT_02405 at 575.587 kb on + strand, within H281DRAFT_02405 at 575.591 kb on - strand, within H281DRAFT_02405
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 569,932 - -0.9 569,996 - +0.4 570,046 + +0.0 570,046 + +0.0 570,046 + +0.4 570,046 + -0.2 570,047 - +0.6 570,047 - +0.2 570,047 - +0.4 570,047 - -0.1 570,163 + +0.2 570,163 + -0.0 570,164 - +0.2 570,432 - H281DRAFT_02403 0.63 -0.0 570,474 + H281DRAFT_02403 0.88 +0.2 570,475 - H281DRAFT_02403 0.88 -0.0 570,548 + -1.6 570,549 - -0.3 570,549 - +0.4 570,558 - -0.3 570,558 - -0.1 570,559 + -0.6 570,619 - +0.6 571,218 - H281DRAFT_02404 0.11 +1.9 571,218 - H281DRAFT_02404 0.11 +1.7 571,218 - H281DRAFT_02404 0.11 +1.6 571,218 - H281DRAFT_02404 0.11 +1.2 571,611 + H281DRAFT_02404 0.21 +1.4 571,633 - H281DRAFT_02404 0.21 +1.4 571,686 + H281DRAFT_02404 0.23 +1.1 571,686 + H281DRAFT_02404 0.23 +1.5 571,689 + H281DRAFT_02404 0.23 +1.4 571,689 + H281DRAFT_02404 0.23 +1.4 571,689 + H281DRAFT_02404 0.23 +1.0 571,698 + H281DRAFT_02404 0.23 +0.6 571,698 + H281DRAFT_02404 0.23 +1.6 571,699 - H281DRAFT_02404 0.23 +1.4 571,750 - H281DRAFT_02404 0.24 +1.2 571,750 - H281DRAFT_02404 0.24 +1.5 571,750 - H281DRAFT_02404 0.24 +1.7 571,750 - H281DRAFT_02404 0.24 +1.5 571,876 - H281DRAFT_02404 0.27 +1.4 572,034 + H281DRAFT_02404 0.31 +1.0 572,034 + H281DRAFT_02404 0.31 +1.7 572,035 - H281DRAFT_02404 0.31 +1.4 572,035 - H281DRAFT_02404 0.31 +0.9 572,097 + H281DRAFT_02404 0.33 +1.0 572,098 - H281DRAFT_02404 0.33 +1.6 572,169 + H281DRAFT_02404 0.35 +0.8 572,169 + H281DRAFT_02404 0.35 +1.0 572,170 - H281DRAFT_02404 0.35 +1.2 572,170 - H281DRAFT_02404 0.35 +1.4 572,171 + H281DRAFT_02404 0.35 +1.3 572,184 + H281DRAFT_02404 0.35 +2.0 572,274 + H281DRAFT_02404 0.37 +1.6 572,274 + H281DRAFT_02404 0.37 +1.0 572,275 - +0.9 572,295 + H281DRAFT_02404 0.38 +1.4 572,295 + H281DRAFT_02404 0.38 +1.3 572,296 - H281DRAFT_02404 0.38 +0.7 572,296 - H281DRAFT_02404 0.38 +1.2 572,296 - H281DRAFT_02404 0.38 +1.0 572,296 - H281DRAFT_02404 0.38 +1.2 572,296 - H281DRAFT_02404 0.38 +1.6 572,296 - H281DRAFT_02404 0.38 +1.3 572,310 + H281DRAFT_02404 0.38 +1.5 572,311 - H281DRAFT_02404 0.38 +0.5 572,406 + H281DRAFT_02404 0.41 +1.1 572,406 + H281DRAFT_02404 0.41 +1.0 572,406 + H281DRAFT_02404 0.41 +1.1 572,407 - H281DRAFT_02404 0.41 +2.2 572,442 + H281DRAFT_02404 0.42 +1.7 572,443 - H281DRAFT_02404 0.42 +1.4 572,887 + H281DRAFT_02404 0.53 +1.9 572,945 + H281DRAFT_02404 0.55 -0.3 572,945 + H281DRAFT_02404 0.55 +1.8 572,946 - H281DRAFT_02404 0.55 +1.5 572,946 - H281DRAFT_02404 0.55 +1.5 572,946 - H281DRAFT_02404 0.55 +1.4 572,946 - H281DRAFT_02404 0.55 +1.1 572,946 - H281DRAFT_02404 0.55 +1.6 573,036 + H281DRAFT_02404 0.57 +1.0 573,037 - H281DRAFT_02404 0.57 +1.3 573,101 + H281DRAFT_02404 0.58 +1.2 573,102 - H281DRAFT_02404 0.58 +1.0 573,102 - H281DRAFT_02404 0.58 +1.4 573,102 - H281DRAFT_02404 0.58 +1.3 573,849 + H281DRAFT_02404 0.77 +1.1 573,923 + H281DRAFT_02404 0.79 +0.2 573,981 + H281DRAFT_02404 0.81 +0.1 573,982 - H281DRAFT_02404 0.81 +1.0 574,077 + H281DRAFT_02404 0.83 -0.4 574,077 + H281DRAFT_02404 0.83 +0.0 574,078 - H281DRAFT_02404 0.83 +0.9 574,144 + H281DRAFT_02404 0.85 +1.0 574,144 + H281DRAFT_02404 0.85 +2.1 574,144 + H281DRAFT_02404 0.85 +0.7 574,144 + H281DRAFT_02404 0.85 +1.3 574,145 - H281DRAFT_02404 0.85 +1.0 574,145 - H281DRAFT_02404 0.85 +0.3 574,145 - H281DRAFT_02404 0.85 +1.3 574,145 - H281DRAFT_02404 0.85 +1.3 574,145 - H281DRAFT_02404 0.85 +1.1 574,145 - H281DRAFT_02404 0.85 +1.1 574,150 + H281DRAFT_02404 0.85 +1.1 574,151 - H281DRAFT_02404 0.85 +1.3 574,268 + H281DRAFT_02404 0.88 +1.2 574,268 + H281DRAFT_02404 0.88 +0.9 574,269 - H281DRAFT_02404 0.88 +1.6 574,323 + H281DRAFT_02404 0.89 +0.9 574,324 - H281DRAFT_02404 0.90 +0.8 574,324 - H281DRAFT_02404 0.90 +0.9 574,324 - H281DRAFT_02404 0.90 +1.0 574,324 - H281DRAFT_02404 0.90 +1.5 574,356 - +1.4 574,482 + +1.5 574,482 + +1.2 574,647 + +1.0 574,709 + +0.5 574,709 + +0.7 574,840 + +0.4 574,840 + +0.6 574,841 - +0.4 574,905 + +0.0 574,905 + -0.4 574,905 + +0.2 574,906 - +0.1 574,987 - +0.4 574,987 - +0.4 574,987 - -0.1 574,997 + +0.3 574,997 + +0.5 575,263 + H281DRAFT_02405 0.31 -0.4 575,263 + +0.9 575,263 + H281DRAFT_02405 0.31 +0.1 575,311 + H281DRAFT_02405 0.35 -0.7 575,444 - H281DRAFT_02405 0.47 +0.5 575,444 - H281DRAFT_02405 0.47 +0.2 575,515 + H281DRAFT_02405 0.53 -0.1 575,515 + H281DRAFT_02405 0.53 -0.1 575,516 - H281DRAFT_02405 0.53 +0.4 575,587 + H281DRAFT_02405 0.59 -1.5 575,591 - H281DRAFT_02405 0.60 +0.7
Or see this region's nucleotide sequence