Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01535 and H281DRAFT_01536 are separated by 94 nucleotides H281DRAFT_01536 and H281DRAFT_01537 overlap by 8 nucleotides H281DRAFT_01537 and H281DRAFT_01538 are separated by 13 nucleotides H281DRAFT_01538 and H281DRAFT_01539 are separated by 200 nucleotides
H281DRAFT_01535: H281DRAFT_01535 - MFS transporter, ACS family, tartrate transporter, at 407,329 to 408,639
_01535
H281DRAFT_01536: H281DRAFT_01536 - putative membrane protein, at 408,734 to 409,267
_01536
H281DRAFT_01537: H281DRAFT_01537 - Plastocyanin, at 409,260 to 409,595
_01537
H281DRAFT_01538: H281DRAFT_01538 - RNA polymerase sigma-70 factor, ECF subfamily, at 409,609 to 410,310
_01538
H281DRAFT_01539: H281DRAFT_01539 - putative spermidine/putrescine transport system substrate-binding protein, at 410,511 to 411,554
_01539
Position (kb) 409
410
411 Strain fitness (log2 ratio) -1
0
1 at 408.645 kb on + strand at 408.699 kb on - strand at 408.788 kb on - strand, within H281DRAFT_01536 at 409.089 kb on - strand, within H281DRAFT_01536 at 409.089 kb on - strand, within H281DRAFT_01536 at 409.109 kb on + strand, within H281DRAFT_01536 at 409.110 kb on - strand, within H281DRAFT_01536 at 409.189 kb on - strand, within H281DRAFT_01536 at 409.353 kb on + strand, within H281DRAFT_01537 at 409.353 kb on + strand, within H281DRAFT_01537 at 409.353 kb on + strand, within H281DRAFT_01537 at 409.354 kb on - strand, within H281DRAFT_01537 at 409.354 kb on - strand, within H281DRAFT_01537 at 409.354 kb on - strand, within H281DRAFT_01537 at 409.423 kb on + strand, within H281DRAFT_01537 at 409.723 kb on - strand, within H281DRAFT_01538 at 409.798 kb on + strand, within H281DRAFT_01538 at 410.346 kb on - strand at 410.404 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 408,645 + -0.6 408,699 - +0.1 408,788 - H281DRAFT_01536 0.10 +0.1 409,089 - H281DRAFT_01536 0.66 +0.2 409,089 - H281DRAFT_01536 0.66 -0.5 409,109 + H281DRAFT_01536 0.70 -0.0 409,110 - H281DRAFT_01536 0.70 +0.7 409,189 - H281DRAFT_01536 0.85 +0.5 409,353 + H281DRAFT_01537 0.28 -0.7 409,353 + H281DRAFT_01537 0.28 +0.0 409,353 + H281DRAFT_01537 0.28 -0.3 409,354 - H281DRAFT_01537 0.28 +0.2 409,354 - H281DRAFT_01537 0.28 -0.9 409,354 - H281DRAFT_01537 0.28 +0.2 409,423 + H281DRAFT_01537 0.49 +0.1 409,723 - H281DRAFT_01538 0.16 +0.6 409,798 + H281DRAFT_01538 0.27 +0.3 410,346 - +0.3 410,404 + +0.1
Or see this region's nucleotide sequence