Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01521 and H281DRAFT_01522 are separated by 610 nucleotides H281DRAFT_01522 and H281DRAFT_01523 are separated by 253 nucleotides
H281DRAFT_01521: H281DRAFT_01521 - putative spermidine/putrescine transport system substrate-binding protein, at 393,500 to 394,639
_01521
H281DRAFT_01522: H281DRAFT_01522 - amino acid ABC transporter substrate-binding protein, PAAT family, at 395,250 to 396,032
_01522
H281DRAFT_01523: H281DRAFT_01523 - hypothetical protein, at 396,286 to 397,401
_01523
Position (kb) 395
396
397 Strain fitness (log2 ratio) -1
0
1 at 394.270 kb on + strand, within H281DRAFT_01521 at 394.273 kb on - strand, within H281DRAFT_01521 at 394.386 kb on - strand, within H281DRAFT_01521 at 394.646 kb on - strand at 394.832 kb on + strand at 394.833 kb on - strand at 394.902 kb on + strand at 395.120 kb on - strand at 395.120 kb on - strand at 395.120 kb on - strand at 395.315 kb on + strand at 395.754 kb on + strand, within H281DRAFT_01522 at 395.982 kb on + strand at 395.982 kb on + strand at 395.983 kb on - strand at 395.983 kb on - strand at 396.003 kb on + strand at 396.003 kb on + strand at 396.004 kb on - strand at 396.030 kb on + strand at 396.031 kb on - strand at 396.033 kb on + strand at 396.382 kb on + strand at 396.383 kb on - strand at 396.591 kb on + strand, within H281DRAFT_01523 at 396.592 kb on - strand, within H281DRAFT_01523 at 396.592 kb on - strand, within H281DRAFT_01523 at 396.760 kb on + strand, within H281DRAFT_01523
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 394,270 + H281DRAFT_01521 0.68 +0.6 394,273 - H281DRAFT_01521 0.68 +0.5 394,386 - H281DRAFT_01521 0.78 +0.1 394,646 - -0.6 394,832 + -0.5 394,833 - -0.7 394,902 + -0.3 395,120 - +0.9 395,120 - -0.1 395,120 - +0.4 395,315 + -0.0 395,754 + H281DRAFT_01522 0.64 +0.5 395,982 + -0.1 395,982 + -0.1 395,983 - +0.2 395,983 - -0.1 396,003 + +0.1 396,003 + +0.2 396,004 - +0.1 396,030 + -0.2 396,031 - +0.9 396,033 + -0.1 396,382 + +1.2 396,383 - -0.5 396,591 + H281DRAFT_01523 0.27 -0.0 396,592 - H281DRAFT_01523 0.27 +0.5 396,592 - H281DRAFT_01523 0.27 -0.1 396,760 + H281DRAFT_01523 0.42 +0.3
Or see this region's nucleotide sequence