Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00316 and H281DRAFT_00317 overlap by 1 nucleotides H281DRAFT_00317 and H281DRAFT_00318 overlap by 1 nucleotides
H281DRAFT_00316: H281DRAFT_00316 - ADP-heptose:LPS heptosyltransferase, at 343,956 to 345,275
_00316
H281DRAFT_00317: H281DRAFT_00317 - O-antigen ligase, at 345,275 to 346,630
_00317
H281DRAFT_00318: H281DRAFT_00318 - Glycosyltransferase involved in cell wall bisynthesis, at 346,630 to 347,865
_00318
Position (kb) 345
346
347 Strain fitness (log2 ratio) -1
0
1
2 at 344.368 kb on + strand, within H281DRAFT_00316 at 344.368 kb on + strand, within H281DRAFT_00316 at 344.369 kb on - strand, within H281DRAFT_00316 at 344.371 kb on - strand, within H281DRAFT_00316 at 344.458 kb on - strand, within H281DRAFT_00316 at 344.493 kb on - strand, within H281DRAFT_00316 at 344.589 kb on + strand, within H281DRAFT_00316 at 344.590 kb on - strand, within H281DRAFT_00316 at 344.635 kb on + strand, within H281DRAFT_00316 at 344.635 kb on + strand at 344.636 kb on - strand, within H281DRAFT_00316 at 344.727 kb on + strand, within H281DRAFT_00316 at 344.727 kb on + strand, within H281DRAFT_00316 at 344.727 kb on + strand at 344.727 kb on + strand, within H281DRAFT_00316 at 344.728 kb on - strand, within H281DRAFT_00316 at 344.821 kb on - strand, within H281DRAFT_00316 at 345.008 kb on + strand, within H281DRAFT_00316 at 345.009 kb on - strand, within H281DRAFT_00316 at 345.009 kb on - strand, within H281DRAFT_00316 at 345.126 kb on - strand, within H281DRAFT_00316 at 345.142 kb on + strand, within H281DRAFT_00316 at 345.142 kb on + strand, within H281DRAFT_00316 at 345.143 kb on - strand, within H281DRAFT_00316 at 345.257 kb on + strand at 345.258 kb on - strand at 345.274 kb on - strand at 345.555 kb on - strand, within H281DRAFT_00317 at 345.722 kb on + strand, within H281DRAFT_00317 at 345.740 kb on - strand, within H281DRAFT_00317 at 345.907 kb on - strand, within H281DRAFT_00317 at 346.142 kb on + strand, within H281DRAFT_00317 at 346.142 kb on + strand, within H281DRAFT_00317 at 346.211 kb on + strand, within H281DRAFT_00317 at 346.643 kb on + strand at 346.643 kb on + strand at 346.884 kb on + strand, within H281DRAFT_00318 at 346.884 kb on + strand, within H281DRAFT_00318 at 347.120 kb on - strand, within H281DRAFT_00318 at 347.152 kb on + strand, within H281DRAFT_00318 at 347.153 kb on - strand, within H281DRAFT_00318 at 347.521 kb on + strand, within H281DRAFT_00318 at 347.524 kb on - strand, within H281DRAFT_00318
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 344,368 + H281DRAFT_00316 0.31 +1.4 344,368 + H281DRAFT_00316 0.31 +1.2 344,369 - H281DRAFT_00316 0.31 +0.7 344,371 - H281DRAFT_00316 0.31 +1.3 344,458 - H281DRAFT_00316 0.38 +1.5 344,493 - H281DRAFT_00316 0.41 +1.7 344,589 + H281DRAFT_00316 0.48 -0.2 344,590 - H281DRAFT_00316 0.48 +1.5 344,635 + H281DRAFT_00316 0.51 +1.0 344,635 + +0.1 344,636 - H281DRAFT_00316 0.52 +0.5 344,727 + H281DRAFT_00316 0.58 -0.1 344,727 + H281DRAFT_00316 0.58 +1.4 344,727 + +2.1 344,727 + H281DRAFT_00316 0.58 +0.8 344,728 - H281DRAFT_00316 0.58 +0.9 344,821 - H281DRAFT_00316 0.66 +1.7 345,008 + H281DRAFT_00316 0.80 +0.7 345,009 - H281DRAFT_00316 0.80 +0.6 345,009 - H281DRAFT_00316 0.80 +1.4 345,126 - H281DRAFT_00316 0.89 +0.9 345,142 + H281DRAFT_00316 0.90 +1.9 345,142 + H281DRAFT_00316 0.90 +0.3 345,143 - H281DRAFT_00316 0.90 +0.6 345,257 + -0.1 345,258 - +1.4 345,274 - +1.0 345,555 - H281DRAFT_00317 0.21 +0.7 345,722 + H281DRAFT_00317 0.33 +0.3 345,740 - H281DRAFT_00317 0.34 +0.8 345,907 - H281DRAFT_00317 0.47 +0.9 346,142 + H281DRAFT_00317 0.64 +0.4 346,142 + H281DRAFT_00317 0.64 +0.6 346,211 + H281DRAFT_00317 0.69 +0.4 346,643 + +0.9 346,643 + -0.4 346,884 + H281DRAFT_00318 0.21 +0.3 346,884 + H281DRAFT_00318 0.21 +0.2 347,120 - H281DRAFT_00318 0.40 -0.6 347,152 + H281DRAFT_00318 0.42 -1.6 347,153 - H281DRAFT_00318 0.42 -0.0 347,521 + H281DRAFT_00318 0.72 +0.2 347,524 - H281DRAFT_00318 0.72 +0.0
Or see this region's nucleotide sequence