Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00277 and H281DRAFT_00278 are separated by 102 nucleotides H281DRAFT_00278 and H281DRAFT_00279 are separated by 94 nucleotides H281DRAFT_00279 and H281DRAFT_00280 overlap by 7 nucleotides H281DRAFT_00280 and H281DRAFT_00281 overlap by 4 nucleotides
H281DRAFT_00277: H281DRAFT_00277 - Tfp pilus assembly protein PilF, at 297,592 to 299,337
_00277
H281DRAFT_00278: H281DRAFT_00278 - Outer membrane protein OmpA, at 299,440 to 300,090
_00278
H281DRAFT_00279: H281DRAFT_00279 - chorismate lyase, at 300,185 to 300,901
_00279
H281DRAFT_00280: H281DRAFT_00280 - G/U mismatch-specific uracil-DNA glycosylase, at 300,895 to 301,368
_00280
H281DRAFT_00281: H281DRAFT_00281 - Spermidine synthase, at 301,365 to 302,276
_00281
Position (kb) 300
301 Strain fitness (log2 ratio) -1
0
1 at 299.417 kb on - strand at 299.441 kb on + strand at 299.549 kb on + strand, within H281DRAFT_00278 at 299.550 kb on - strand, within H281DRAFT_00278 at 299.550 kb on - strand, within H281DRAFT_00278 at 299.866 kb on - strand, within H281DRAFT_00278 at 300.487 kb on - strand, within H281DRAFT_00279 at 300.537 kb on - strand, within H281DRAFT_00279 at 300.537 kb on - strand, within H281DRAFT_00279 at 300.603 kb on - strand, within H281DRAFT_00279 at 300.742 kb on - strand, within H281DRAFT_00279 at 300.750 kb on + strand, within H281DRAFT_00279 at 300.751 kb on - strand, within H281DRAFT_00279 at 300.936 kb on + strand at 300.936 kb on + strand at 300.936 kb on + strand at 300.937 kb on - strand at 300.991 kb on + strand, within H281DRAFT_00280 at 301.289 kb on + strand, within H281DRAFT_00280 at 301.289 kb on + strand, within H281DRAFT_00280 at 301.289 kb on + strand, within H281DRAFT_00280 at 301.290 kb on - strand, within H281DRAFT_00280 at 301.317 kb on + strand, within H281DRAFT_00280 at 301.317 kb on + strand, within H281DRAFT_00280 at 301.317 kb on + strand, within H281DRAFT_00280 at 301.317 kb on + strand, within H281DRAFT_00280 at 301.318 kb on - strand, within H281DRAFT_00280 at 301.567 kb on - strand, within H281DRAFT_00281 at 301.683 kb on - strand, within H281DRAFT_00281
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 299,417 - +0.2 299,441 + -0.0 299,549 + H281DRAFT_00278 0.17 +0.4 299,550 - H281DRAFT_00278 0.17 -1.2 299,550 - H281DRAFT_00278 0.17 +0.6 299,866 - H281DRAFT_00278 0.65 +0.7 300,487 - H281DRAFT_00279 0.42 +0.9 300,537 - H281DRAFT_00279 0.49 +1.2 300,537 - H281DRAFT_00279 0.49 -0.1 300,603 - H281DRAFT_00279 0.58 +0.4 300,742 - H281DRAFT_00279 0.78 -0.6 300,750 + H281DRAFT_00279 0.79 +0.6 300,751 - H281DRAFT_00279 0.79 +0.3 300,936 + -0.1 300,936 + +0.4 300,936 + -0.8 300,937 - +0.2 300,991 + H281DRAFT_00280 0.20 +0.0 301,289 + H281DRAFT_00280 0.83 -0.2 301,289 + H281DRAFT_00280 0.83 -0.1 301,289 + H281DRAFT_00280 0.83 -0.6 301,290 - H281DRAFT_00280 0.83 +1.1 301,317 + H281DRAFT_00280 0.89 +0.6 301,317 + H281DRAFT_00280 0.89 +1.2 301,317 + H281DRAFT_00280 0.89 +0.0 301,317 + H281DRAFT_00280 0.89 +0.1 301,318 - H281DRAFT_00280 0.89 -0.2 301,567 - H281DRAFT_00281 0.22 +1.2 301,683 - H281DRAFT_00281 0.35 -0.3
Or see this region's nucleotide sequence