Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3524 and HP15_3525 overlap by 19 nucleotides HP15_3525 and HP15_3526 are separated by 63 nucleotides
HP15_3524: HP15_3524 - PAS/PAC sensor protein, at 3,711,869 to 3,712,891
_3524
HP15_3525: HP15_3525 - protein containing iron sulfur domain-containing, CDGSH-type domains, at 3,712,873 to 3,713,121
_3525
HP15_3526: HP15_3526 - conserved hypothetical protein, at 3,713,185 to 3,714,210
_3526
Position (kb)
3712
3713
3714 Strain fitness (log2 ratio)
-1
0
1 at 3711.881 kb on + strand at 3711.953 kb on - strand at 3712.131 kb on + strand, within HP15_3524 at 3712.139 kb on - strand, within HP15_3524 at 3712.157 kb on - strand, within HP15_3524 at 3712.236 kb on - strand, within HP15_3524 at 3712.270 kb on + strand, within HP15_3524 at 3712.287 kb on - strand, within HP15_3524 at 3712.305 kb on + strand, within HP15_3524 at 3712.369 kb on - strand, within HP15_3524 at 3712.379 kb on + strand, within HP15_3524 at 3712.380 kb on + strand, within HP15_3524 at 3712.380 kb on + strand, within HP15_3524 at 3712.380 kb on + strand, within HP15_3524 at 3712.386 kb on + strand, within HP15_3524 at 3712.391 kb on + strand, within HP15_3524 at 3712.394 kb on - strand, within HP15_3524 at 3712.421 kb on + strand, within HP15_3524 at 3712.442 kb on - strand, within HP15_3524 at 3712.513 kb on + strand, within HP15_3524 at 3712.541 kb on - strand, within HP15_3524 at 3712.555 kb on - strand, within HP15_3524 at 3712.574 kb on - strand, within HP15_3524 at 3712.630 kb on - strand, within HP15_3524 at 3712.655 kb on - strand, within HP15_3524 at 3712.671 kb on + strand, within HP15_3524 at 3712.977 kb on + strand, within HP15_3525 at 3712.985 kb on - strand, within HP15_3525 at 3712.995 kb on + strand, within HP15_3525 at 3713.076 kb on - strand, within HP15_3525 at 3713.183 kb on + strand at 3713.192 kb on + strand at 3713.219 kb on - strand at 3713.232 kb on + strand at 3713.276 kb on + strand at 3713.284 kb on - strand at 3713.580 kb on - strand, within HP15_3526 at 3713.596 kb on + strand, within HP15_3526 at 3713.609 kb on + strand, within HP15_3526 at 3713.676 kb on + strand, within HP15_3526 at 3713.969 kb on + strand, within HP15_3526 at 3714.075 kb on + strand, within HP15_3526
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,711,881 + -0.2 3,711,953 - -0.3 3,712,131 + HP15_3524 0.26 -0.7 3,712,139 - HP15_3524 0.26 +0.0 3,712,157 - HP15_3524 0.28 -0.9 3,712,236 - HP15_3524 0.36 +0.4 3,712,270 + HP15_3524 0.39 +0.4 3,712,287 - HP15_3524 0.41 -0.7 3,712,305 + HP15_3524 0.43 -0.3 3,712,369 - HP15_3524 0.49 -1.7 3,712,379 + HP15_3524 0.50 +0.6 3,712,380 + HP15_3524 0.50 -0.4 3,712,380 + HP15_3524 0.50 +0.5 3,712,380 + HP15_3524 0.50 +0.1 3,712,386 + HP15_3524 0.51 +1.4 3,712,391 + HP15_3524 0.51 -0.3 3,712,394 - HP15_3524 0.51 -0.0 3,712,421 + HP15_3524 0.54 +0.2 3,712,442 - HP15_3524 0.56 +0.5 3,712,513 + HP15_3524 0.63 -1.1 3,712,541 - HP15_3524 0.66 -0.0 3,712,555 - HP15_3524 0.67 -0.3 3,712,574 - HP15_3524 0.69 +0.6 3,712,630 - HP15_3524 0.74 +0.9 3,712,655 - HP15_3524 0.77 -0.2 3,712,671 + HP15_3524 0.78 +1.2 3,712,977 + HP15_3525 0.42 -0.1 3,712,985 - HP15_3525 0.45 -0.3 3,712,995 + HP15_3525 0.49 -0.8 3,713,076 - HP15_3525 0.82 -0.8 3,713,183 + -0.4 3,713,192 + -0.4 3,713,219 - +0.2 3,713,232 + +1.1 3,713,276 + -0.8 3,713,284 - -0.1 3,713,580 - HP15_3526 0.38 +0.7 3,713,596 + HP15_3526 0.40 +0.6 3,713,609 + HP15_3526 0.41 -0.6 3,713,676 + HP15_3526 0.48 +0.4 3,713,969 + HP15_3526 0.76 +0.7 3,714,075 + HP15_3526 0.87 -0.1
Or see this region's nucleotide sequence