Strain Fitness in Marinobacter adhaerens HP15 around HP15_3525

Experiment: m.b. perchlorate 50 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3524 and HP15_3525 overlap by 19 nucleotidesHP15_3525 and HP15_3526 are separated by 63 nucleotides HP15_3524: HP15_3524 - PAS/PAC sensor protein, at 3,711,869 to 3,712,891 _3524 HP15_3525: HP15_3525 - protein containing iron sulfur domain-containing, CDGSH-type domains, at 3,712,873 to 3,713,121 _3525 HP15_3526: HP15_3526 - conserved hypothetical protein, at 3,713,185 to 3,714,210 _3526 Position (kb) 3712 3713 3714Strain fitness (log2 ratio) -1 0 1at 3711.881 kb on + strandat 3711.953 kb on - strandat 3712.131 kb on + strand, within HP15_3524at 3712.139 kb on - strand, within HP15_3524at 3712.157 kb on - strand, within HP15_3524at 3712.236 kb on - strand, within HP15_3524at 3712.270 kb on + strand, within HP15_3524at 3712.287 kb on - strand, within HP15_3524at 3712.305 kb on + strand, within HP15_3524at 3712.369 kb on - strand, within HP15_3524at 3712.379 kb on + strand, within HP15_3524at 3712.380 kb on + strand, within HP15_3524at 3712.380 kb on + strand, within HP15_3524at 3712.380 kb on + strand, within HP15_3524at 3712.386 kb on + strand, within HP15_3524at 3712.391 kb on + strand, within HP15_3524at 3712.394 kb on - strand, within HP15_3524at 3712.421 kb on + strand, within HP15_3524at 3712.442 kb on - strand, within HP15_3524at 3712.513 kb on + strand, within HP15_3524at 3712.541 kb on - strand, within HP15_3524at 3712.555 kb on - strand, within HP15_3524at 3712.574 kb on - strand, within HP15_3524at 3712.630 kb on - strand, within HP15_3524at 3712.655 kb on - strand, within HP15_3524at 3712.671 kb on + strand, within HP15_3524at 3712.977 kb on + strand, within HP15_3525at 3712.985 kb on - strand, within HP15_3525at 3712.995 kb on + strand, within HP15_3525at 3713.076 kb on - strand, within HP15_3525at 3713.183 kb on + strandat 3713.192 kb on + strandat 3713.219 kb on - strandat 3713.232 kb on + strandat 3713.276 kb on + strandat 3713.284 kb on - strandat 3713.580 kb on - strand, within HP15_3526at 3713.596 kb on + strand, within HP15_3526at 3713.609 kb on + strand, within HP15_3526at 3713.676 kb on + strand, within HP15_3526at 3713.969 kb on + strand, within HP15_3526at 3714.075 kb on + strand, within HP15_3526

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM
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3,711,881 + -0.2
3,711,953 - -0.3
3,712,131 + HP15_3524 0.26 -0.7
3,712,139 - HP15_3524 0.26 +0.0
3,712,157 - HP15_3524 0.28 -0.9
3,712,236 - HP15_3524 0.36 +0.4
3,712,270 + HP15_3524 0.39 +0.4
3,712,287 - HP15_3524 0.41 -0.7
3,712,305 + HP15_3524 0.43 -0.3
3,712,369 - HP15_3524 0.49 -1.7
3,712,379 + HP15_3524 0.50 +0.6
3,712,380 + HP15_3524 0.50 -0.4
3,712,380 + HP15_3524 0.50 +0.5
3,712,380 + HP15_3524 0.50 +0.1
3,712,386 + HP15_3524 0.51 +1.4
3,712,391 + HP15_3524 0.51 -0.3
3,712,394 - HP15_3524 0.51 -0.0
3,712,421 + HP15_3524 0.54 +0.2
3,712,442 - HP15_3524 0.56 +0.5
3,712,513 + HP15_3524 0.63 -1.1
3,712,541 - HP15_3524 0.66 -0.0
3,712,555 - HP15_3524 0.67 -0.3
3,712,574 - HP15_3524 0.69 +0.6
3,712,630 - HP15_3524 0.74 +0.9
3,712,655 - HP15_3524 0.77 -0.2
3,712,671 + HP15_3524 0.78 +1.2
3,712,977 + HP15_3525 0.42 -0.1
3,712,985 - HP15_3525 0.45 -0.3
3,712,995 + HP15_3525 0.49 -0.8
3,713,076 - HP15_3525 0.82 -0.8
3,713,183 + -0.4
3,713,192 + -0.4
3,713,219 - +0.2
3,713,232 + +1.1
3,713,276 + -0.8
3,713,284 - -0.1
3,713,580 - HP15_3526 0.38 +0.7
3,713,596 + HP15_3526 0.40 +0.6
3,713,609 + HP15_3526 0.41 -0.6
3,713,676 + HP15_3526 0.48 +0.4
3,713,969 + HP15_3526 0.76 +0.7
3,714,075 + HP15_3526 0.87 -0.1

Or see this region's nucleotide sequence