Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2491 and HP15_2492 overlap by 8 nucleotides HP15_2492 and HP15_2493 overlap by 4 nucleotides HP15_2493 and HP15_2494 are separated by 54 nucleotides
HP15_2491: HP15_2491 - kinase, at 2,630,828 to 2,631,196
_2491
HP15_2492: HP15_2492 - methyltransferase, at 2,631,189 to 2,631,965
_2492
HP15_2493: HP15_2493 - methyltransferase, at 2,631,962 to 2,632,960
_2493
HP15_2494: HP15_2494 - adenlyosuccinate synthase, at 2,633,015 to 2,634,310
_2494
Position (kb)
2631
2632
2633 Strain fitness (log2 ratio)
-2
-1
0
1 at 2631.026 kb on + strand, within HP15_2491 at 2631.079 kb on - strand, within HP15_2491 at 2631.225 kb on - strand at 2631.242 kb on + strand at 2631.348 kb on - strand, within HP15_2492 at 2631.397 kb on + strand, within HP15_2492 at 2631.402 kb on + strand, within HP15_2492 at 2631.402 kb on + strand, within HP15_2492 at 2631.410 kb on - strand, within HP15_2492 at 2631.410 kb on - strand, within HP15_2492 at 2631.410 kb on - strand, within HP15_2492 at 2631.410 kb on - strand, within HP15_2492 at 2631.595 kb on - strand, within HP15_2492 at 2631.654 kb on - strand, within HP15_2492 at 2631.691 kb on - strand, within HP15_2492 at 2631.691 kb on - strand, within HP15_2492 at 2631.701 kb on - strand, within HP15_2492 at 2631.845 kb on + strand, within HP15_2492 at 2632.039 kb on - strand at 2632.054 kb on - strand at 2632.137 kb on + strand, within HP15_2493 at 2632.185 kb on + strand, within HP15_2493 at 2632.195 kb on + strand, within HP15_2493 at 2632.203 kb on - strand, within HP15_2493 at 2632.270 kb on - strand, within HP15_2493 at 2632.316 kb on + strand, within HP15_2493 at 2632.932 kb on + strand at 2632.932 kb on + strand at 2632.962 kb on - strand at 2633.010 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 2,631,026 + HP15_2491 0.54 +0.4 2,631,079 - HP15_2491 0.68 -2.2 2,631,225 - -1.2 2,631,242 + -0.3 2,631,348 - HP15_2492 0.20 +0.6 2,631,397 + HP15_2492 0.27 +0.0 2,631,402 + HP15_2492 0.27 -1.8 2,631,402 + HP15_2492 0.27 +0.1 2,631,410 - HP15_2492 0.28 -0.6 2,631,410 - HP15_2492 0.28 -1.0 2,631,410 - HP15_2492 0.28 +1.0 2,631,410 - HP15_2492 0.28 +1.0 2,631,595 - HP15_2492 0.52 +0.1 2,631,654 - HP15_2492 0.60 +0.2 2,631,691 - HP15_2492 0.65 -1.3 2,631,691 - HP15_2492 0.65 -0.4 2,631,701 - HP15_2492 0.66 -0.7 2,631,845 + HP15_2492 0.84 -0.6 2,632,039 - -0.9 2,632,054 - -0.3 2,632,137 + HP15_2493 0.18 -2.0 2,632,185 + HP15_2493 0.22 -0.7 2,632,195 + HP15_2493 0.23 -0.6 2,632,203 - HP15_2493 0.24 +0.2 2,632,270 - HP15_2493 0.31 -0.2 2,632,316 + HP15_2493 0.35 +0.1 2,632,932 + -0.7 2,632,932 + -1.8 2,632,962 - -0.6 2,633,010 + +0.8
Or see this region's nucleotide sequence