Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2092 and HP15_2093 are separated by 53 nucleotides HP15_2093 and HP15_2094 are separated by 9 nucleotides HP15_2094 and HP15_2095 are separated by 159 nucleotides
HP15_2092: HP15_2092 - conserved hypothetical protein, at 2,190,465 to 2,191,232
_2092
HP15_2093: HP15_2093 - signal transduction histidine kinase, at 2,191,286 to 2,193,613
_2093
HP15_2094: HP15_2094 - glutathione peroxidase, at 2,193,623 to 2,194,207
_2094
HP15_2095: HP15_2095 - aspartate aminotransferase, at 2,194,367 to 2,195,581
_2095
Position (kb)
2191
2192
2193
2194 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2190.602 kb on - strand, within HP15_2092 at 2190.633 kb on + strand, within HP15_2092 at 2190.660 kb on - strand, within HP15_2092 at 2190.696 kb on + strand, within HP15_2092 at 2190.733 kb on - strand, within HP15_2092 at 2190.942 kb on + strand, within HP15_2092 at 2191.022 kb on - strand, within HP15_2092 at 2191.236 kb on - strand at 2191.314 kb on + strand at 2191.322 kb on - strand at 2191.379 kb on - strand at 2191.596 kb on + strand, within HP15_2093 at 2191.599 kb on - strand, within HP15_2093 at 2191.619 kb on - strand, within HP15_2093 at 2191.671 kb on - strand, within HP15_2093 at 2191.787 kb on + strand, within HP15_2093 at 2191.788 kb on + strand, within HP15_2093 at 2191.808 kb on - strand, within HP15_2093 at 2191.897 kb on + strand, within HP15_2093 at 2191.937 kb on + strand, within HP15_2093 at 2192.048 kb on - strand, within HP15_2093 at 2192.119 kb on + strand, within HP15_2093 at 2192.119 kb on + strand, within HP15_2093 at 2192.127 kb on - strand, within HP15_2093 at 2192.253 kb on + strand, within HP15_2093 at 2192.313 kb on - strand, within HP15_2093 at 2192.404 kb on - strand, within HP15_2093 at 2192.414 kb on + strand, within HP15_2093 at 2192.414 kb on - strand, within HP15_2093 at 2192.493 kb on - strand, within HP15_2093 at 2192.536 kb on - strand, within HP15_2093 at 2192.536 kb on - strand, within HP15_2093 at 2192.563 kb on - strand, within HP15_2093 at 2192.563 kb on - strand, within HP15_2093 at 2192.573 kb on - strand, within HP15_2093 at 2192.778 kb on + strand, within HP15_2093 at 2192.778 kb on + strand, within HP15_2093 at 2192.786 kb on - strand, within HP15_2093 at 2192.810 kb on + strand, within HP15_2093 at 2192.818 kb on - strand, within HP15_2093 at 2192.881 kb on + strand, within HP15_2093 at 2193.023 kb on + strand, within HP15_2093 at 2193.097 kb on - strand, within HP15_2093 at 2193.110 kb on - strand, within HP15_2093 at 2193.365 kb on - strand, within HP15_2093 at 2193.387 kb on - strand at 2193.621 kb on + strand at 2193.722 kb on - strand, within HP15_2094 at 2193.755 kb on + strand, within HP15_2094 at 2193.866 kb on + strand, within HP15_2094 at 2193.879 kb on - strand, within HP15_2094 at 2193.934 kb on - strand, within HP15_2094 at 2194.058 kb on - strand, within HP15_2094 at 2194.156 kb on + strand at 2194.158 kb on + strand at 2194.166 kb on - strand at 2194.435 kb on - strand at 2194.569 kb on + strand, within HP15_2095
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 2,190,602 - HP15_2092 0.18 +1.7 2,190,633 + HP15_2092 0.22 -1.7 2,190,660 - HP15_2092 0.25 +0.1 2,190,696 + HP15_2092 0.30 +0.7 2,190,733 - HP15_2092 0.35 -1.0 2,190,942 + HP15_2092 0.62 -2.7 2,191,022 - HP15_2092 0.73 -0.4 2,191,236 - -0.7 2,191,314 + -0.7 2,191,322 - -0.1 2,191,379 - -1.2 2,191,596 + HP15_2093 0.13 -1.3 2,191,599 - HP15_2093 0.13 +0.3 2,191,619 - HP15_2093 0.14 +1.9 2,191,671 - HP15_2093 0.17 -0.7 2,191,787 + HP15_2093 0.22 +0.1 2,191,788 + HP15_2093 0.22 -0.0 2,191,808 - HP15_2093 0.22 -2.5 2,191,897 + HP15_2093 0.26 -0.3 2,191,937 + HP15_2093 0.28 -1.8 2,192,048 - HP15_2093 0.33 -0.8 2,192,119 + HP15_2093 0.36 +0.1 2,192,119 + HP15_2093 0.36 -1.2 2,192,127 - HP15_2093 0.36 -1.0 2,192,253 + HP15_2093 0.42 -0.6 2,192,313 - HP15_2093 0.44 -0.5 2,192,404 - HP15_2093 0.48 -1.0 2,192,414 + HP15_2093 0.48 -0.9 2,192,414 - HP15_2093 0.48 +0.3 2,192,493 - HP15_2093 0.52 -0.4 2,192,536 - HP15_2093 0.54 -0.4 2,192,536 - HP15_2093 0.54 -0.5 2,192,563 - HP15_2093 0.55 -0.5 2,192,563 - HP15_2093 0.55 -0.2 2,192,573 - HP15_2093 0.55 -0.1 2,192,778 + HP15_2093 0.64 -0.5 2,192,778 + HP15_2093 0.64 -2.8 2,192,786 - HP15_2093 0.64 +0.2 2,192,810 + HP15_2093 0.65 -0.5 2,192,818 - HP15_2093 0.66 -0.9 2,192,881 + HP15_2093 0.69 -1.9 2,193,023 + HP15_2093 0.75 +1.3 2,193,097 - HP15_2093 0.78 -0.4 2,193,110 - HP15_2093 0.78 -1.2 2,193,365 - HP15_2093 0.89 -0.6 2,193,387 - -1.7 2,193,621 + -0.5 2,193,722 - HP15_2094 0.17 +0.4 2,193,755 + HP15_2094 0.23 +0.2 2,193,866 + HP15_2094 0.42 +1.0 2,193,879 - HP15_2094 0.44 +0.1 2,193,934 - HP15_2094 0.53 -0.4 2,194,058 - HP15_2094 0.74 -0.8 2,194,156 + +0.9 2,194,158 + -0.4 2,194,166 - +0.7 2,194,435 - -2.0 2,194,569 + HP15_2095 0.17 +1.9
Or see this region's nucleotide sequence