Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1488 and HP15_1489 are separated by 68 nucleotides HP15_1489 and HP15_1490 are separated by 63 nucleotides HP15_1490 and HP15_1491 are separated by 74 nucleotides HP15_1491 and HP15_1492 overlap by 11 nucleotides
HP15_1488: HP15_1488 - cysteine desulfurase IscS, at 1,562,931 to 1,564,079
_1488
HP15_1489: HP15_1489 - nucleoside diphosphate kinase, at 1,564,148 to 1,564,576
_1489
HP15_1490: HP15_1490 - conserved hypothetical protein, at 1,564,640 to 1,565,752
_1490
HP15_1491: HP15_1491 - type IV pilus biogenesis protein PilF, at 1,565,827 to 1,566,600
_1491
HP15_1492: HP15_1492 - conserved hypothetical protein, at 1,566,590 to 1,567,627
_1492
Position (kb) 1564
1565
1566 Strain fitness (log2 ratio) -1
0
1 at 1564.584 kb on + strand at 1565.031 kb on + strand, within HP15_1490 at 1565.084 kb on + strand, within HP15_1490 at 1565.523 kb on + strand, within HP15_1490 at 1565.791 kb on + strand at 1565.951 kb on + strand, within HP15_1491 at 1565.956 kb on + strand, within HP15_1491
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 1,564,584 + +0.0 1,565,031 + HP15_1490 0.35 +0.8 1,565,084 + HP15_1490 0.40 +0.7 1,565,523 + HP15_1490 0.79 +0.4 1,565,791 + -1.1 1,565,951 + HP15_1491 0.16 +1.1 1,565,956 + HP15_1491 0.17 +0.1
Or see this region's nucleotide sequence