Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2802 and Dsui_2803 are separated by 82 nucleotides Dsui_2803 and Dsui_2804 are separated by 42 nucleotides
Dsui_2802: Dsui_2802 - flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family, at 2,973,062 to 2,974,330
_2802
Dsui_2803: Dsui_2803 - GGDEF domain-containing protein, at 2,974,413 to 2,974,898
_2803
Dsui_2804: Dsui_2804 - diguanylate cyclase (GGDEF) domain-containing protein, at 2,974,941 to 2,976,557
_2804
Position (kb)
2974
2975 Strain fitness (log2 ratio)
-2
-1
0
1 at 2973.622 kb on - strand at 2973.859 kb on + strand, within Dsui_2802 at 2973.862 kb on + strand, within Dsui_2802 at 2973.873 kb on + strand, within Dsui_2802 at 2974.063 kb on + strand, within Dsui_2802 at 2974.112 kb on + strand, within Dsui_2802 at 2974.181 kb on + strand, within Dsui_2802 at 2974.210 kb on - strand at 2974.257 kb on - strand at 2974.273 kb on + strand at 2974.277 kb on + strand at 2974.290 kb on + strand at 2974.298 kb on - strand at 2974.408 kb on + strand at 2974.534 kb on + strand, within Dsui_2803 at 2974.536 kb on + strand, within Dsui_2803 at 2974.539 kb on - strand at 2974.561 kb on + strand, within Dsui_2803 at 2974.576 kb on + strand, within Dsui_2803 at 2974.603 kb on + strand, within Dsui_2803 at 2974.686 kb on + strand, within Dsui_2803 at 2974.695 kb on + strand, within Dsui_2803 at 2974.763 kb on - strand, within Dsui_2803 at 2974.777 kb on + strand, within Dsui_2803 at 2974.785 kb on - strand, within Dsui_2803 at 2974.785 kb on - strand, within Dsui_2803 at 2974.800 kb on - strand, within Dsui_2803 at 2974.803 kb on + strand, within Dsui_2803 at 2974.805 kb on - strand, within Dsui_2803 at 2974.863 kb on + strand at 2974.865 kb on - strand at 2975.124 kb on - strand, within Dsui_2804 at 2975.145 kb on + strand, within Dsui_2804 at 2975.205 kb on - strand, within Dsui_2804 at 2975.350 kb on + strand at 2975.358 kb on - strand, within Dsui_2804 at 2975.445 kb on + strand, within Dsui_2804 at 2975.445 kb on + strand at 2975.779 kb on + strand at 2975.793 kb on - strand, within Dsui_2804
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 2,973,622 - +0.8 2,973,859 + Dsui_2802 0.63 -1.1 2,973,862 + Dsui_2802 0.63 -2.4 2,973,873 + Dsui_2802 0.64 +0.2 2,974,063 + Dsui_2802 0.79 -0.5 2,974,112 + Dsui_2802 0.83 -0.4 2,974,181 + Dsui_2802 0.88 +0.5 2,974,210 - +0.8 2,974,257 - -0.2 2,974,273 + +0.8 2,974,277 + +0.0 2,974,290 + +0.5 2,974,298 - -0.2 2,974,408 + -0.2 2,974,534 + Dsui_2803 0.25 -1.5 2,974,536 + Dsui_2803 0.25 -1.1 2,974,539 - -0.2 2,974,561 + Dsui_2803 0.30 +0.1 2,974,576 + Dsui_2803 0.34 -0.8 2,974,603 + Dsui_2803 0.39 -1.2 2,974,686 + Dsui_2803 0.56 -1.6 2,974,695 + Dsui_2803 0.58 +0.2 2,974,763 - Dsui_2803 0.72 -1.2 2,974,777 + Dsui_2803 0.75 -1.7 2,974,785 - Dsui_2803 0.77 -2.6 2,974,785 - Dsui_2803 0.77 -2.0 2,974,800 - Dsui_2803 0.80 -0.8 2,974,803 + Dsui_2803 0.80 -0.1 2,974,805 - Dsui_2803 0.81 -1.2 2,974,863 + -1.0 2,974,865 - +0.8 2,975,124 - Dsui_2804 0.11 -0.5 2,975,145 + Dsui_2804 0.13 -1.2 2,975,205 - Dsui_2804 0.16 -0.6 2,975,350 + -1.2 2,975,358 - Dsui_2804 0.26 -0.2 2,975,445 + Dsui_2804 0.31 -0.8 2,975,445 + +0.8 2,975,779 + -0.2 2,975,793 - Dsui_2804 0.53 -0.8
Or see this region's nucleotide sequence