Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2339 and Dsui_2340 are separated by 4 nucleotides Dsui_2340 and Dsui_2341 are separated by 4 nucleotides Dsui_2341 and Dsui_2342 are separated by 1 nucleotides
Dsui_2339: Dsui_2339 - putative domain HDIG-containing protein, at 2,490,723 to 2,491,634
_2339
Dsui_2340: Dsui_2340 - ABC-type multidrug transport system, permease component, at 2,491,639 to 2,492,772
_2340
Dsui_2341: Dsui_2341 - ABC-type multidrug transport system, ATPase component, at 2,492,777 to 2,493,721
_2341
Dsui_2342: Dsui_2342 - multidrug resistance efflux pump, at 2,493,723 to 2,494,688
_2342
Position (kb)
2491
2492
2493 Strain fitness (log2 ratio)
-2
-1
0
1 at 2490.674 kb on + strand at 2490.692 kb on + strand at 2490.743 kb on - strand at 2490.812 kb on + strand at 2490.812 kb on + strand at 2490.812 kb on + strand at 2490.820 kb on - strand at 2490.820 kb on - strand at 2490.850 kb on + strand, within Dsui_2339 at 2490.990 kb on - strand, within Dsui_2339 at 2491.033 kb on + strand, within Dsui_2339 at 2491.041 kb on + strand at 2491.051 kb on + strand, within Dsui_2339 at 2491.087 kb on - strand at 2491.190 kb on - strand, within Dsui_2339 at 2491.240 kb on - strand at 2491.431 kb on - strand at 2491.539 kb on + strand, within Dsui_2339 at 2491.613 kb on + strand at 2491.675 kb on + strand at 2491.676 kb on - strand at 2491.729 kb on + strand at 2491.764 kb on - strand, within Dsui_2340 at 2491.794 kb on - strand, within Dsui_2340 at 2491.799 kb on - strand, within Dsui_2340 at 2491.801 kb on - strand, within Dsui_2340 at 2491.814 kb on - strand, within Dsui_2340 at 2491.857 kb on + strand, within Dsui_2340 at 2491.903 kb on - strand, within Dsui_2340 at 2491.928 kb on + strand, within Dsui_2340 at 2491.952 kb on + strand, within Dsui_2340 at 2491.965 kb on + strand, within Dsui_2340 at 2491.973 kb on + strand, within Dsui_2340 at 2491.976 kb on - strand, within Dsui_2340 at 2491.981 kb on - strand, within Dsui_2340 at 2492.042 kb on - strand at 2492.042 kb on - strand, within Dsui_2340 at 2492.042 kb on - strand, within Dsui_2340 at 2492.042 kb on - strand, within Dsui_2340 at 2492.189 kb on - strand, within Dsui_2340 at 2492.204 kb on - strand, within Dsui_2340 at 2492.310 kb on + strand at 2492.487 kb on - strand, within Dsui_2340 at 2492.624 kb on - strand, within Dsui_2340 at 2492.684 kb on - strand at 2492.753 kb on - strand at 2492.753 kb on - strand at 2492.796 kb on + strand at 2492.799 kb on - strand at 2492.983 kb on + strand at 2492.991 kb on - strand, within Dsui_2341 at 2493.021 kb on - strand, within Dsui_2341 at 2493.067 kb on - strand, within Dsui_2341 at 2493.170 kb on - strand, within Dsui_2341 at 2493.219 kb on - strand, within Dsui_2341 at 2493.455 kb on + strand at 2493.507 kb on - strand, within Dsui_2341 at 2493.544 kb on + strand at 2493.638 kb on - strand at 2493.751 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 2,490,674 + +1.1 2,490,692 + -1.1 2,490,743 - +0.9 2,490,812 + -1.1 2,490,812 + +0.9 2,490,812 + +0.9 2,490,820 - +0.9 2,490,820 - +0.9 2,490,850 + Dsui_2339 0.14 -0.7 2,490,990 - Dsui_2339 0.29 -1.1 2,491,033 + Dsui_2339 0.34 -0.1 2,491,041 + +0.9 2,491,051 + Dsui_2339 0.36 -1.4 2,491,087 - -0.7 2,491,190 - Dsui_2339 0.51 -1.4 2,491,240 - -1.4 2,491,431 - +0.9 2,491,539 + Dsui_2339 0.89 -0.1 2,491,613 + -0.4 2,491,675 + -0.7 2,491,676 - +0.9 2,491,729 + -0.1 2,491,764 - Dsui_2340 0.11 +0.9 2,491,794 - Dsui_2340 0.14 +0.9 2,491,799 - Dsui_2340 0.14 -0.1 2,491,801 - Dsui_2340 0.14 -0.1 2,491,814 - Dsui_2340 0.15 -1.9 2,491,857 + Dsui_2340 0.19 -0.1 2,491,903 - Dsui_2340 0.23 +0.9 2,491,928 + Dsui_2340 0.25 -1.5 2,491,952 + Dsui_2340 0.28 +0.9 2,491,965 + Dsui_2340 0.29 -0.1 2,491,973 + Dsui_2340 0.29 -0.7 2,491,976 - Dsui_2340 0.30 +0.9 2,491,981 - Dsui_2340 0.30 -1.9 2,492,042 - +0.9 2,492,042 - Dsui_2340 0.36 +0.9 2,492,042 - Dsui_2340 0.36 -2.1 2,492,042 - Dsui_2340 0.36 -0.1 2,492,189 - Dsui_2340 0.49 +0.9 2,492,204 - Dsui_2340 0.50 +0.9 2,492,310 + -0.7 2,492,487 - Dsui_2340 0.75 -1.9 2,492,624 - Dsui_2340 0.87 -0.1 2,492,684 - -0.1 2,492,753 - +0.9 2,492,753 - -0.9 2,492,796 + +1.0 2,492,799 - -0.1 2,492,983 + +0.9 2,492,991 - Dsui_2341 0.23 -1.4 2,493,021 - Dsui_2341 0.26 -0.1 2,493,067 - Dsui_2341 0.31 -0.7 2,493,170 - Dsui_2341 0.42 -0.7 2,493,219 - Dsui_2341 0.47 -1.9 2,493,455 + -0.1 2,493,507 - Dsui_2341 0.77 -0.1 2,493,544 + +0.9 2,493,638 - -0.1 2,493,751 - -0.7
Or see this region's nucleotide sequence