Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2093 and Dsui_2094 are separated by 307 nucleotides Dsui_2094 and Dsui_2095 are separated by 72 nucleotides
Dsui_2093: Dsui_2093 - hypothetical protein, at 2,214,481 to 2,215,341
_2093
Dsui_2094: Dsui_2094 - putative autotransporter protein, at 2,215,649 to 2,219,413
_2094
Dsui_2095: Dsui_2095 - methylase involved in ubiquinone/menaquinone biosynthesis, at 2,219,486 to 2,220,172
_2095
Position (kb)
2215
2216
2217
2218
2219
2220 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2214.735 kb on - strand, within Dsui_2093 at 2214.763 kb on - strand, within Dsui_2093 at 2214.837 kb on - strand, within Dsui_2093 at 2215.095 kb on + strand, within Dsui_2093 at 2215.137 kb on + strand, within Dsui_2093 at 2215.278 kb on + strand at 2215.296 kb on + strand at 2215.698 kb on - strand at 2215.779 kb on + strand at 2215.802 kb on + strand at 2216.066 kb on - strand, within Dsui_2094 at 2216.151 kb on + strand at 2216.262 kb on - strand, within Dsui_2094 at 2216.310 kb on + strand at 2216.318 kb on - strand at 2216.936 kb on + strand, within Dsui_2094 at 2216.989 kb on - strand at 2217.011 kb on - strand, within Dsui_2094 at 2217.071 kb on + strand at 2217.127 kb on + strand at 2217.145 kb on - strand at 2217.209 kb on - strand at 2217.212 kb on + strand at 2217.220 kb on - strand, within Dsui_2094 at 2217.303 kb on - strand at 2217.337 kb on + strand at 2217.495 kb on - strand at 2217.507 kb on + strand at 2217.669 kb on - strand at 2217.675 kb on + strand at 2217.900 kb on + strand at 2218.019 kb on - strand, within Dsui_2094 at 2218.124 kb on - strand at 2218.154 kb on - strand at 2218.215 kb on - strand at 2218.261 kb on - strand at 2218.261 kb on - strand, within Dsui_2094 at 2218.403 kb on + strand at 2218.486 kb on + strand, within Dsui_2094 at 2218.868 kb on + strand, within Dsui_2094 at 2218.876 kb on - strand at 2219.023 kb on - strand at 2219.294 kb on + strand at 2219.491 kb on + strand at 2219.491 kb on + strand at 2219.533 kb on + strand at 2219.671 kb on - strand at 2219.778 kb on + strand, within Dsui_2095 at 2219.782 kb on + strand, within Dsui_2095 at 2219.946 kb on + strand at 2220.064 kb on - strand at 2220.161 kb on + strand at 2220.211 kb on + strand at 2220.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 2,214,735 - Dsui_2093 0.30 -0.7 2,214,763 - Dsui_2093 0.33 -1.9 2,214,837 - Dsui_2093 0.41 -0.7 2,215,095 + Dsui_2093 0.71 -0.1 2,215,137 + Dsui_2093 0.76 -0.1 2,215,278 + -0.1 2,215,296 + -0.1 2,215,698 - -0.1 2,215,779 + -0.7 2,215,802 + +0.9 2,216,066 - Dsui_2094 0.11 -1.1 2,216,151 + +0.9 2,216,262 - Dsui_2094 0.16 +0.9 2,216,310 + +0.9 2,216,318 - +0.9 2,216,936 + Dsui_2094 0.34 -1.1 2,216,989 - +0.9 2,217,011 - Dsui_2094 0.36 -1.6 2,217,071 + -0.7 2,217,127 + +0.9 2,217,145 - +0.9 2,217,209 - +0.9 2,217,212 + +0.9 2,217,220 - Dsui_2094 0.42 -0.7 2,217,303 - +0.9 2,217,337 + +0.9 2,217,495 - +0.9 2,217,507 + +0.9 2,217,669 - +1.9 2,217,675 + +0.9 2,217,900 + -0.1 2,218,019 - Dsui_2094 0.63 -0.7 2,218,124 - -1.1 2,218,154 - +0.9 2,218,215 - +0.9 2,218,261 - -0.1 2,218,261 - Dsui_2094 0.69 -2.4 2,218,403 + +0.9 2,218,486 + Dsui_2094 0.75 -0.1 2,218,868 + Dsui_2094 0.85 +0.9 2,218,876 - +0.9 2,219,023 - -0.7 2,219,294 + +0.9 2,219,491 + +0.9 2,219,491 + -0.1 2,219,533 + +0.8 2,219,671 - +0.9 2,219,778 + Dsui_2095 0.43 +0.9 2,219,782 + Dsui_2095 0.43 -0.7 2,219,946 + +0.9 2,220,064 - +0.9 2,220,161 + -0.7 2,220,211 + -2.4 2,220,316 - +0.9
Or see this region's nucleotide sequence