Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1267 and Dsui_1268 are separated by 124 nucleotides Dsui_1268 and Dsui_1269 are separated by 124 nucleotides Dsui_1269 and Dsui_1270 are separated by 33 nucleotides
Dsui_1267: Dsui_1267 - riboflavin biosynthesis protein RibD, at 1,330,399 to 1,331,496
_1267
Dsui_1268: Dsui_1268 - dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis, at 1,331,621 to 1,332,370
_1268
Dsui_1269: Dsui_1269 - hypothetical protein, at 1,332,495 to 1,332,917
_1269
Dsui_1270: Dsui_1270 - C-terminal processing peptidase, at 1,332,951 to 1,334,354
_1270
Position (kb) 1332
1333 Strain fitness (log2 ratio) -2
-1
0
1 at 1332.478 kb on - strand at 1332.573 kb on - strand, within Dsui_1269 at 1332.605 kb on + strand, within Dsui_1269 at 1332.620 kb on + strand, within Dsui_1269 at 1332.629 kb on + strand, within Dsui_1269 at 1332.647 kb on - strand, within Dsui_1269 at 1332.653 kb on + strand at 1332.716 kb on + strand, within Dsui_1269 at 1332.748 kb on - strand, within Dsui_1269 at 1332.949 kb on + strand at 1332.987 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 1,332,478 - -0.1 1,332,573 - Dsui_1269 0.18 -0.6 1,332,605 + Dsui_1269 0.26 +0.6 1,332,620 + Dsui_1269 0.30 -0.4 1,332,629 + Dsui_1269 0.32 +1.6 1,332,647 - Dsui_1269 0.36 -0.3 1,332,653 + +0.6 1,332,716 + Dsui_1269 0.52 +0.9 1,332,748 - Dsui_1269 0.60 -0.1 1,332,949 + -1.9 1,332,987 - -0.3
Or see this region's nucleotide sequence