Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0408 and Dsui_0409 overlap by 4 nucleotides Dsui_0409 and Dsui_0410 are separated by 26 nucleotides
Dsui_0408: Dsui_0408 - cation/multidrug efflux pump, at 406,249 to 409,452
_0408
Dsui_0409: Dsui_0409 - RND family efflux transporter, MFP subunit, at 409,449 to 410,603
_0409
Dsui_0410: Dsui_0410 - transcriptional regulator, at 410,630 to 411,265
_0410
Position (kb) 409
410
411 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 408.467 kb on + strand, within Dsui_0408 at 408.495 kb on + strand, within Dsui_0408 at 408.495 kb on + strand at 408.681 kb on + strand, within Dsui_0408 at 408.771 kb on + strand, within Dsui_0408 at 408.884 kb on + strand, within Dsui_0408 at 408.962 kb on + strand, within Dsui_0408 at 408.999 kb on - strand, within Dsui_0408 at 409.009 kb on - strand, within Dsui_0408 at 409.024 kb on + strand, within Dsui_0408 at 409.055 kb on - strand, within Dsui_0408 at 409.062 kb on + strand at 409.070 kb on + strand at 409.078 kb on - strand, within Dsui_0408 at 409.113 kb on + strand, within Dsui_0408 at 409.113 kb on + strand, within Dsui_0408 at 409.154 kb on + strand at 409.160 kb on + strand at 409.265 kb on - strand at 409.272 kb on + strand at 409.350 kb on + strand at 409.378 kb on + strand at 409.609 kb on + strand at 409.617 kb on - strand, within Dsui_0409 at 409.631 kb on + strand, within Dsui_0409 at 409.669 kb on + strand, within Dsui_0409 at 409.697 kb on - strand, within Dsui_0409 at 409.747 kb on - strand, within Dsui_0409 at 409.747 kb on - strand, within Dsui_0409 at 409.852 kb on - strand, within Dsui_0409 at 409.908 kb on - strand, within Dsui_0409 at 409.980 kb on - strand, within Dsui_0409 at 410.171 kb on - strand, within Dsui_0409 at 410.252 kb on + strand, within Dsui_0409 at 410.499 kb on + strand at 410.558 kb on - strand at 410.806 kb on + strand at 410.961 kb on - strand, within Dsui_0410 at 411.260 kb on + strand at 411.336 kb on - strand at 411.406 kb on - strand at 411.472 kb on - strand at 411.472 kb on - strand at 411.495 kb on + strand at 411.550 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 408,467 + Dsui_0408 0.69 -0.9 408,495 + Dsui_0408 0.70 -0.3 408,495 + +0.7 408,681 + Dsui_0408 0.76 -0.3 408,771 + Dsui_0408 0.79 +0.7 408,884 + Dsui_0408 0.82 -3.0 408,962 + Dsui_0408 0.85 -0.9 408,999 - Dsui_0408 0.86 +0.0 409,009 - Dsui_0408 0.86 +1.5 409,024 + Dsui_0408 0.87 -0.3 409,055 - Dsui_0408 0.88 -0.5 409,062 + +0.7 409,070 + -0.3 409,078 - Dsui_0408 0.88 +0.0 409,113 + Dsui_0408 0.89 -0.9 409,113 + Dsui_0408 0.89 -1.9 409,154 + -2.1 409,160 + -0.3 409,265 - -0.2 409,272 + -1.3 409,350 + -1.3 409,378 + -1.9 409,609 + +1.7 409,617 - Dsui_0409 0.15 -0.1 409,631 + Dsui_0409 0.16 +0.7 409,669 + Dsui_0409 0.19 -0.9 409,697 - Dsui_0409 0.21 -0.8 409,747 - Dsui_0409 0.26 -1.4 409,747 - Dsui_0409 0.26 -0.1 409,852 - Dsui_0409 0.35 +0.5 409,908 - Dsui_0409 0.40 -0.5 409,980 - Dsui_0409 0.46 -0.1 410,171 - Dsui_0409 0.63 +0.0 410,252 + Dsui_0409 0.70 +0.7 410,499 + -0.3 410,558 - +0.0 410,806 + +0.7 410,961 - Dsui_0410 0.52 +0.8 411,260 + -0.3 411,336 - +0.7 411,406 - -0.3 411,472 - -0.3 411,472 - +0.7 411,495 + +0.7 411,550 - -0.9
Or see this region's nucleotide sequence