Strain Fitness in Dechlorosoma suillum PS around Dsui_0203

Experiment: a-Ketoglutaric (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0201 and Dsui_0202 are separated by 3 nucleotidesDsui_0202 and Dsui_0203 are separated by 14 nucleotidesDsui_0203 and Dsui_0204 are separated by 1 nucleotides Dsui_0201: Dsui_0201 - hypothetical protein, at 200,992 to 201,759 _0201 Dsui_0202: Dsui_0202 - hypothetical protein, at 201,763 to 202,095 _0202 Dsui_0203: Dsui_0203 - hypothetical protein, at 202,110 to 202,382 _0203 Dsui_0204: Dsui_0204 - hypothetical protein, at 202,384 to 204,846 _0204 Position (kb) 202 203Strain fitness (log2 ratio) -2 -1 0 1at 201.185 kb on - strand, within Dsui_0201at 201.195 kb on + strand, within Dsui_0201at 201.231 kb on - strand, within Dsui_0201at 201.299 kb on + strand, within Dsui_0201at 201.322 kb on - strand, within Dsui_0201at 201.367 kb on - strand, within Dsui_0201at 201.427 kb on + strand, within Dsui_0201at 201.510 kb on - strand, within Dsui_0201at 201.757 kb on - strandat 201.850 kb on - strand, within Dsui_0202at 201.881 kb on - strand, within Dsui_0202at 201.881 kb on - strandat 202.083 kb on - strandat 202.122 kb on - strandat 202.137 kb on + strandat 202.156 kb on - strand, within Dsui_0203at 202.183 kb on - strand, within Dsui_0203at 202.380 kb on - strandat 202.412 kb on + strandat 202.413 kb on + strandat 202.559 kb on + strandat 202.567 kb on - strandat 202.567 kb on - strandat 202.569 kb on + strandat 202.654 kb on + strand, within Dsui_0204at 202.659 kb on + strand, within Dsui_0204at 202.962 kb on + strand, within Dsui_0204at 202.963 kb on - strand, within Dsui_0204at 202.963 kb on - strand, within Dsui_0204at 203.124 kb on + strandat 203.273 kb on + strand, within Dsui_0204at 203.322 kb on + strand, within Dsui_0204at 203.342 kb on + strand, within Dsui_0204at 203.359 kb on + strand, within Dsui_0204

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Ketoglutaric (C)
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201,185 - Dsui_0201 0.25 +0.7
201,195 + Dsui_0201 0.26 -0.3
201,231 - Dsui_0201 0.31 -0.9
201,299 + Dsui_0201 0.40 +0.7
201,322 - Dsui_0201 0.43 +0.7
201,367 - Dsui_0201 0.49 -0.3
201,427 + Dsui_0201 0.57 -0.3
201,510 - Dsui_0201 0.67 +0.7
201,757 - +0.7
201,850 - Dsui_0202 0.26 +0.7
201,881 - Dsui_0202 0.35 +0.7
201,881 - +0.7
202,083 - +0.7
202,122 - +0.7
202,137 + +0.7
202,156 - Dsui_0203 0.17 -0.9
202,183 - Dsui_0203 0.27 -1.6
202,380 - -0.9
202,412 + -0.3
202,413 + +0.7
202,559 + -0.3
202,567 - -0.9
202,567 - -0.9
202,569 + -0.3
202,654 + Dsui_0204 0.11 +0.7
202,659 + Dsui_0204 0.11 -0.3
202,962 + Dsui_0204 0.23 -0.9
202,963 - Dsui_0204 0.24 -2.1
202,963 - Dsui_0204 0.24 -0.3
203,124 + +0.7
203,273 + Dsui_0204 0.36 -0.3
203,322 + Dsui_0204 0.38 +0.7
203,342 + Dsui_0204 0.39 -0.3
203,359 + Dsui_0204 0.40 -2.5

Or see this region's nucleotide sequence