Strain Fitness in Dechlorosoma suillum PS around Dsui_0170

Experiment: a-Ketoglutaric (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0169 and Dsui_0170 overlap by 4 nucleotidesDsui_0170 and Dsui_0171 are separated by 555 nucleotidesDsui_0171 and Dsui_0172 overlap by 4 nucleotides Dsui_0169: Dsui_0169 - anthranilate phosphoribosyltransferase, at 172,705 to 173,727 _0169 Dsui_0170: Dsui_0170 - glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase, at 173,724 to 174,296 _0170 Dsui_0171: Dsui_0171 - putative transcriptional regulator, at 174,852 to 175,070 _0171 Dsui_0172: Dsui_0172 - hypothetical protein, at 175,067 to 175,741 _0172 Position (kb) 173 174 175Strain fitness (log2 ratio) -2 -1 0 1at 173.733 kb on - strandat 173.733 kb on - strandat 174.500 kb on + strandat 174.530 kb on + strandat 174.536 kb on + strandat 174.536 kb on + strandat 174.544 kb on - strandat 174.544 kb on - strandat 174.544 kb on - strandat 174.544 kb on - strandat 174.544 kb on - strandat 174.566 kb on + strandat 174.595 kb on + strandat 174.663 kb on + strandat 174.666 kb on - strandat 174.671 kb on - strandat 174.676 kb on - strandat 174.676 kb on - strandat 174.697 kb on + strandat 174.753 kb on + strandat 174.780 kb on - strandat 174.780 kb on - strandat 174.785 kb on - strandat 174.822 kb on + strandat 174.823 kb on - strandat 174.823 kb on - strandat 174.955 kb on + strand, within Dsui_0171at 174.982 kb on + strand, within Dsui_0171at 174.990 kb on - strand, within Dsui_0171at 175.018 kb on - strand, within Dsui_0171at 175.028 kb on + strand, within Dsui_0171at 175.041 kb on - strand, within Dsui_0171at 175.074 kb on - strandat 175.122 kb on + strandat 175.122 kb on + strandat 175.123 kb on + strandat 175.212 kb on + strand, within Dsui_0172at 175.215 kb on - strand, within Dsui_0172at 175.238 kb on + strandat 175.246 kb on - strand, within Dsui_0172at 175.257 kb on - strandat 175.274 kb on + strand, within Dsui_0172

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Ketoglutaric (C)
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173,733 - +0.3
173,733 - -0.1
174,500 + +0.7
174,530 + +0.7
174,536 + -0.3
174,536 + -0.3
174,544 - +0.7
174,544 - +0.7
174,544 - -0.9
174,544 - -0.3
174,544 - -0.3
174,566 + -2.1
174,595 + +0.7
174,663 + -0.9
174,666 - -0.3
174,671 - -1.3
174,676 - +0.7
174,676 - -1.6
174,697 + +0.7
174,753 + -0.3
174,780 - +0.7
174,780 - -0.3
174,785 - -0.3
174,822 + +0.7
174,823 - -1.6
174,823 - +0.7
174,955 + Dsui_0171 0.47 -0.3
174,982 + Dsui_0171 0.59 -0.3
174,990 - Dsui_0171 0.63 -1.6
175,018 - Dsui_0171 0.76 -1.6
175,028 + Dsui_0171 0.80 -1.9
175,041 - Dsui_0171 0.86 -2.1
175,074 - -0.3
175,122 + -0.5
175,122 + -0.5
175,123 + -1.1
175,212 + Dsui_0172 0.21 -0.3
175,215 - Dsui_0172 0.22 -2.1
175,238 + -0.3
175,246 - Dsui_0172 0.27 -0.9
175,257 - +0.7
175,274 + Dsui_0172 0.31 +0.7

Or see this region's nucleotide sequence