Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0057 and Dsui_0058 are separated by 7 nucleotides Dsui_0058 and Dsui_0059 overlap by 62 nucleotides Dsui_0059 and Dsui_0060 are separated by 3 nucleotides Dsui_0060 and Dsui_0061 overlap by 4 nucleotides
Dsui_0057: Dsui_0057 - glycosyltransferase, at 54,298 to 55,488
_0057
Dsui_0058: Dsui_0058 - Glycosyl transferase family 11, at 55,496 to 56,431
_0058
Dsui_0059: Dsui_0059 - glycosyl transferase, at 56,370 to 57,104
_0059
Dsui_0060: Dsui_0060 - GDP-D-mannose dehydratase, at 57,108 to 58,082
_0060
Dsui_0061: Dsui_0061 - glycosyltransferase, at 58,079 to 59,182
_0061
Position (kb) 56
57
58 Strain fitness (log2 ratio) -1
0
1
2 at 55.384 kb on - strand at 55.394 kb on - strand at 55.397 kb on + strand at 55.405 kb on - strand at 55.438 kb on - strand at 55.455 kb on - strand at 55.455 kb on - strand at 55.461 kb on + strand at 55.483 kb on + strand at 55.702 kb on + strand, within Dsui_0058 at 55.727 kb on + strand, within Dsui_0058 at 55.784 kb on + strand, within Dsui_0058 at 55.792 kb on - strand, within Dsui_0058 at 55.833 kb on + strand, within Dsui_0058 at 55.856 kb on + strand, within Dsui_0058 at 55.897 kb on - strand, within Dsui_0058 at 55.935 kb on + strand, within Dsui_0058 at 55.947 kb on - strand, within Dsui_0058 at 55.964 kb on - strand, within Dsui_0058 at 56.149 kb on - strand, within Dsui_0058 at 56.159 kb on + strand, within Dsui_0058 at 56.193 kb on - strand, within Dsui_0058 at 56.250 kb on - strand, within Dsui_0058 at 56.367 kb on + strand at 56.386 kb on - strand at 56.391 kb on + strand at 56.426 kb on - strand at 56.464 kb on + strand, within Dsui_0059 at 56.677 kb on - strand, within Dsui_0059 at 56.787 kb on - strand, within Dsui_0059 at 56.860 kb on + strand, within Dsui_0059 at 56.860 kb on + strand, within Dsui_0059 at 56.860 kb on + strand, within Dsui_0059 at 56.865 kb on + strand, within Dsui_0059 at 56.865 kb on + strand, within Dsui_0059 at 56.868 kb on - strand, within Dsui_0059 at 56.868 kb on - strand, within Dsui_0059 at 56.871 kb on + strand, within Dsui_0059 at 56.873 kb on - strand, within Dsui_0059 at 56.957 kb on + strand, within Dsui_0059 at 57.007 kb on - strand, within Dsui_0059 at 57.021 kb on + strand, within Dsui_0059 at 57.041 kb on - strand at 57.106 kb on + strand at 57.119 kb on - strand at 57.132 kb on - strand at 57.137 kb on - strand at 57.139 kb on + strand at 57.147 kb on - strand at 57.147 kb on - strand at 57.183 kb on - strand at 57.275 kb on - strand, within Dsui_0060 at 57.283 kb on - strand, within Dsui_0060 at 57.297 kb on - strand, within Dsui_0060 at 57.331 kb on + strand, within Dsui_0060 at 57.420 kb on + strand, within Dsui_0060 at 57.486 kb on + strand, within Dsui_0060 at 57.539 kb on - strand, within Dsui_0060 at 57.584 kb on + strand, within Dsui_0060 at 57.590 kb on - strand, within Dsui_0060 at 57.592 kb on - strand, within Dsui_0060 at 57.681 kb on + strand, within Dsui_0060 at 57.762 kb on - strand, within Dsui_0060 at 57.764 kb on + strand, within Dsui_0060 at 57.764 kb on + strand, within Dsui_0060 at 57.772 kb on - strand, within Dsui_0060 at 57.816 kb on + strand, within Dsui_0060 at 57.829 kb on - strand, within Dsui_0060 at 57.831 kb on + strand, within Dsui_0060 at 57.831 kb on + strand, within Dsui_0060 at 57.838 kb on - strand, within Dsui_0060 at 57.863 kb on + strand, within Dsui_0060 at 57.863 kb on + strand, within Dsui_0060 at 57.882 kb on + strand, within Dsui_0060 at 57.888 kb on - strand, within Dsui_0060 at 57.903 kb on + strand, within Dsui_0060 at 57.994 kb on + strand at 57.994 kb on + strand at 58.003 kb on + strand at 58.023 kb on - strand at 58.046 kb on - strand at 58.087 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 55,384 - -0.3 55,394 - +1.1 55,397 + -1.6 55,405 - +1.1 55,438 - +0.4 55,455 - +1.3 55,455 - +2.5 55,461 + +0.7 55,483 + -0.3 55,702 + Dsui_0058 0.22 +0.7 55,727 + Dsui_0058 0.25 +1.0 55,784 + Dsui_0058 0.31 -1.3 55,792 - Dsui_0058 0.32 +1.3 55,833 + Dsui_0058 0.36 +0.7 55,856 + Dsui_0058 0.38 -0.3 55,897 - Dsui_0058 0.43 +1.2 55,935 + Dsui_0058 0.47 -0.3 55,947 - Dsui_0058 0.48 +0.9 55,964 - Dsui_0058 0.50 +1.4 56,149 - Dsui_0058 0.70 +1.0 56,159 + Dsui_0058 0.71 -0.3 56,193 - Dsui_0058 0.74 +0.6 56,250 - Dsui_0058 0.81 +1.2 56,367 + -0.9 56,386 - +1.8 56,391 + +0.7 56,426 - +1.3 56,464 + Dsui_0059 0.13 +0.7 56,677 - Dsui_0059 0.42 +1.4 56,787 - Dsui_0059 0.57 +2.4 56,860 + Dsui_0059 0.67 -1.3 56,860 + Dsui_0059 0.67 -0.3 56,860 + Dsui_0059 0.67 +0.7 56,865 + Dsui_0059 0.67 -1.6 56,865 + Dsui_0059 0.67 +0.7 56,868 - Dsui_0059 0.68 +1.2 56,868 - Dsui_0059 0.68 +1.0 56,871 + Dsui_0059 0.68 +0.7 56,873 - Dsui_0059 0.68 +1.2 56,957 + Dsui_0059 0.80 -1.6 57,007 - Dsui_0059 0.87 +0.5 57,021 + Dsui_0059 0.89 +0.7 57,041 - +1.9 57,106 + -1.6 57,119 - +1.1 57,132 - -0.3 57,137 - +1.2 57,139 + -1.6 57,147 - -0.3 57,147 - +0.9 57,183 - +1.3 57,275 - Dsui_0060 0.17 +1.0 57,283 - Dsui_0060 0.18 +0.7 57,297 - Dsui_0060 0.19 +1.2 57,331 + Dsui_0060 0.23 +0.7 57,420 + Dsui_0060 0.32 -0.3 57,486 + Dsui_0060 0.39 -0.9 57,539 - Dsui_0060 0.44 +1.4 57,584 + Dsui_0060 0.49 -0.3 57,590 - Dsui_0060 0.49 +2.0 57,592 - Dsui_0060 0.50 +1.5 57,681 + Dsui_0060 0.59 -0.9 57,762 - Dsui_0060 0.67 +0.9 57,764 + Dsui_0060 0.67 +0.7 57,764 + Dsui_0060 0.67 -0.3 57,772 - Dsui_0060 0.68 +0.0 57,816 + Dsui_0060 0.73 +0.7 57,829 - Dsui_0060 0.74 +1.3 57,831 + Dsui_0060 0.74 +0.7 57,831 + Dsui_0060 0.74 -1.6 57,838 - Dsui_0060 0.75 +1.5 57,863 + Dsui_0060 0.77 -0.3 57,863 + Dsui_0060 0.77 -0.9 57,882 + Dsui_0060 0.79 -0.3 57,888 - Dsui_0060 0.80 +1.4 57,903 + Dsui_0060 0.82 +0.7 57,994 + +0.7 57,994 + +0.7 58,003 + -1.6 58,023 - +1.4 58,046 - +0.0 58,087 + -0.3
Or see this region's nucleotide sequence