Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02262

Experiment: PYE 0.5x 25C survival rep2 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 25C survival rep2 12 days
2,412,478	-		CCNA_02261	0.53	-4.6
2,412,478	-		CCNA_02261	0.53	-4.0
2,412,504	-		CCNA_02261	0.54	-2.6
2,412,577	-		CCNA_02261	0.58	-1.6
2,412,581	+		CCNA_02261	0.58	+1.3
2,412,584	-		CCNA_02261	0.58	-3.5
2,412,588	-		CCNA_02261	0.58	-3.3
2,412,604	-		CCNA_02261	0.59	-2.8
2,412,630	+		CCNA_02261	0.60	+2.3
2,412,630	+		CCNA_02261	0.60	+2.3
2,412,630	+		CCNA_02261	0.60	+2.3
2,412,631	-		CCNA_02261	0.61	-2.6
2,412,638	-		CCNA_02261	0.61	-2.2
2,412,638	-		CCNA_02261	0.61	-0.5
2,412,638	-		CCNA_02261	0.61	-3.3
2,412,638	-		CCNA_02261	0.61	-4.8
2,412,638	-		CCNA_02261	0.61	-0.8
2,412,638	-		CCNA_02261	0.61	-5.0
2,412,643	-		CCNA_02261	0.61	-2.4
2,412,643	-		CCNA_02261	0.61	-3.3
2,412,705	+		CCNA_02261	0.64	-2.6
2,412,720	-		CCNA_02261	0.65	-4.3
2,412,739	-		CCNA_02261	0.66	-3.0
2,412,762	+		CCNA_02261	0.67	-3.5
2,412,762	+		CCNA_02261	0.67	-3.0
2,412,762	+		CCNA_02261	0.67	-0.3
2,412,762	+		CCNA_02261	0.67	-1.9
2,412,770	-		CCNA_02261	0.67	-0.5
2,412,855	+		CCNA_02261	0.72	+2.3
2,412,862	-		CCNA_02261	0.72	-0.9
2,412,863	-		CCNA_02261	0.72	-1.9
2,412,863	-		CCNA_02261	0.72	-2.8
2,412,876	+		CCNA_02261	0.73	+0.3
2,412,905	+		CCNA_02261	0.74	-1.3
2,412,913	-		CCNA_02261	0.75	-4.7
2,412,913	-		CCNA_02261	0.75	-0.4
2,412,948	+		CCNA_02261	0.76	+1.3
2,412,958	+		CCNA_02261	0.77	+0.7
2,413,045	-		CCNA_02261	0.81	-1.5
2,413,088	+		CCNA_02261	0.83	+2.3
2,413,105	+		CCNA_02261	0.84	+0.3
2,413,105	+		CCNA_02261	0.84	+0.3
2,413,105	+		CCNA_02261	0.84	-1.3
2,413,127	+		CCNA_02261	0.85	+0.7
2,413,128	-		CCNA_02261	0.85	-3.4
2,413,135	-		CCNA_02261	0.86	-3.6
2,413,137	+		CCNA_02261	0.86	+2.3
2,413,142	+		CCNA_02261	0.86	-1.3
2,413,150	-		CCNA_02261	0.86	-1.9
2,413,174	+		CCNA_02261	0.88	-0.3
2,413,242	+				-0.0
2,413,250	-				-1.4
2,413,250	-				-2.2
2,413,274	-				-3.1
2,413,291	-				-2.9
2,413,305	+				+2.3
2,413,305	+				+2.3
2,413,326	+				+1.3
2,413,365	+				+2.3
2,413,390	+				+2.3
2,413,556	-				+1.7
2,413,557	-				-0.0
2,413,616	+				-0.1
2,413,621	+				+1.1
2,413,621	+				-0.7
2,413,623	-				+0.3
2,413,635	+				-0.3
2,413,671	+				-0.5
2,413,693	+				+1.3
2,413,751	+				-1.2
2,413,769	-				-0.5
2,413,771	+				-0.8
2,413,779	-				-2.4
2,413,823	+				+0.7
2,413,825	-				+0.3
2,413,831	-				-1.5
2,413,893	+		CCNA_02262	0.11	-2.0
2,413,916	+		CCNA_02262	0.12	-0.3
2,414,022	+		CCNA_02262	0.15	-2.3
2,414,022	+		CCNA_02262	0.15	-0.7
2,414,040	-		CCNA_02262	0.15	-0.9
2,414,047	+		CCNA_02262	0.15	+0.3
2,414,062	+		CCNA_02262	0.16	-2.0
2,414,067	+		CCNA_02262	0.16	+0.3
2,414,070	-		CCNA_02262	0.16	-0.2
2,414,070	-		CCNA_02262	0.16	-0.0
2,414,088	-		CCNA_02262	0.16	-0.0
2,414,095	+				-0.0
2,414,102	+		CCNA_02262	0.17	+2.3
2,414,136	+		CCNA_02262	0.18	-0.3
2,414,144	-		CCNA_02262	0.18	+0.1
2,414,154	-		CCNA_02262	0.18	+0.7
2,414,167	-		CCNA_02262	0.18	+1.3
2,414,187	+		CCNA_02262	0.19	+2.3
2,414,195	-		CCNA_02262	0.19	-0.7
2,414,206	+		CCNA_02262	0.19	+0.4
2,414,214	-		CCNA_02262	0.20	-2.5
2,414,214	-		CCNA_02262	0.20	+0.2
2,414,215	+		CCNA_02262	0.20	-1.0
2,414,291	-		CCNA_02262	0.22	+0.6
2,414,306	+		CCNA_02262	0.22	+2.0
2,414,388	+		CCNA_02262	0.24	+0.7
2,414,388	+		CCNA_02262	0.24	+1.3
2,414,390	-		CCNA_02262	0.24	-1.5
2,414,396	-		CCNA_02262	0.24	+0.1
2,414,396	-		CCNA_02262	0.24	-1.3
2,414,448	-		CCNA_02262	0.26	-1.6
2,414,529	-		CCNA_02262	0.28	-0.5
2,414,529	-		CCNA_02262	0.28	+1.3
2,414,529	-		CCNA_02262	0.28	-0.9
2,414,588	-		CCNA_02262	0.29	+1.3
2,414,610	-		CCNA_02262	0.30	-1.3
2,414,610	-		CCNA_02262	0.30	-1.2
2,414,610	-		CCNA_02262	0.30	-0.0
2,414,621	-		CCNA_02262	0.30	-1.0
2,414,653	+		CCNA_02262	0.31	-0.0
2,414,673	+		CCNA_02262	0.31	+0.6
2,414,673	+		CCNA_02262	0.31	+0.7
2,414,673	+		CCNA_02262	0.31	+0.7
2,414,673	+		CCNA_02262	0.31	+0.1
2,414,673	+		CCNA_02262	0.31	+1.3
2,414,681	-		CCNA_02262	0.32	+0.3
2,414,681	-		CCNA_02262	0.32	+0.7
2,414,681	-		CCNA_02262	0.32	-0.5
2,414,681	-		CCNA_02262	0.32	+0.2
2,414,728	+		CCNA_02262	0.33	+1.3
2,414,728	-		CCNA_02262	0.33	+0.1
2,414,736	+		CCNA_02262	0.33	+1.3
2,414,749	+		CCNA_02262	0.33	+1.3
2,414,758	-		CCNA_02262	0.34	+1.3
2,414,776	+		CCNA_02262	0.34	-0.3
2,414,776	+		CCNA_02262	0.34	+0.3
2,414,776	+		CCNA_02262	0.34	-0.0
2,414,776	+		CCNA_02262	0.34	+2.3
2,414,776	+		CCNA_02262	0.34	-0.5
2,414,784	+		CCNA_02262	0.34	+2.3
2,414,784	-		CCNA_02262	0.34	+1.0
2,414,784	-		CCNA_02262	0.34	+1.3
2,414,784	-		CCNA_02262	0.34	-2.7
2,414,784	-		CCNA_02262	0.34	+0.3
2,414,784	-		CCNA_02262	0.34	-0.2
2,414,784	-		CCNA_02262	0.34	-1.3
2,414,784	-		CCNA_02262	0.34	-1.9
2,414,784	-		CCNA_02262	0.34	-1.9
2,414,820	+		CCNA_02262	0.35	-0.0
2,414,820	+		CCNA_02262	0.35	+0.7
2,414,828	-		CCNA_02262	0.35	-0.0
2,414,874	+		CCNA_02262	0.36	-1.8
2,414,882	-		CCNA_02262	0.37	-0.6
2,414,882	-				+0.6
2,414,882	-		CCNA_02262	0.37	+1.3
2,414,882	-		CCNA_02262	0.37	+1.3
2,414,883	-		CCNA_02262	0.37	-1.3
2,414,884	-		CCNA_02262	0.37	+0.3
2,414,907	-		CCNA_02262	0.37	+0.3
2,414,909	+		CCNA_02262	0.37	+0.3
2,414,909	+		CCNA_02262	0.37	-1.1
2,414,909	+		CCNA_02262	0.37	-0.3
2,414,917	-		CCNA_02262	0.38	-0.5
2,414,917	-		CCNA_02262	0.38	+1.3
2,414,917	-		CCNA_02262	0.38	-2.9
2,414,921	-		CCNA_02262	0.38	+1.3
2,414,925	+		CCNA_02262	0.38	+2.3
2,414,985	+		CCNA_02262	0.39	+1.3
2,415,014	-		CCNA_02262	0.40	+3.3
2,415,016	+		CCNA_02262	0.40	-2.7
2,415,123	-		CCNA_02262	0.43	+2.3
2,415,142	+		CCNA_02262	0.43	+0.6
2,415,150	-		CCNA_02262	0.44	+2.3
2,415,155	-		CCNA_02262	0.44	-0.1
2,415,165	-		CCNA_02262	0.44	-0.1
2,415,210	-		CCNA_02262	0.45	+0.1
2,415,228	+		CCNA_02262	0.46	-0.7
2,415,282	+		CCNA_02262	0.47	-1.4
2,415,282	+		CCNA_02262	0.47	-0.2
2,415,282	+		CCNA_02262	0.47	-0.7
2,415,282	+		CCNA_02262	0.47	+1.3
2,415,290	-		CCNA_02262	0.47	-0.8
2,415,290	-		CCNA_02262	0.47	+0.2
2,415,290	-		CCNA_02262	0.47	-0.5
2,415,290	-		CCNA_02262	0.47	+0.7
2,415,296	+		CCNA_02262	0.47	+2.3
2,415,298	-		CCNA_02262	0.47	-1.8
2,415,304	-		CCNA_02262	0.47	+0.1
2,415,304	-		CCNA_02262	0.47	+0.7
2,415,323	-		CCNA_02262	0.48	-1.0
2,415,324	-		CCNA_02262	0.48	-0.7
2,415,332	+		CCNA_02262	0.48	-0.6
2,415,338	+		CCNA_02262	0.48	+1.3
2,415,338	+		CCNA_02262	0.48	-1.9
2,415,338	+		CCNA_02262	0.48	-0.9
2,415,340	-		CCNA_02262	0.48	-1.7
2,415,346	-		CCNA_02262	0.49	-0.0
2,415,379	+		CCNA_02262	0.49	+0.7
2,415,379	+		CCNA_02262	0.49	-1.0
2,415,379	+		CCNA_02262	0.49	+2.3
2,415,379	+		CCNA_02262	0.49	+0.1
2,415,387	-		CCNA_02262	0.50	-0.1
2,415,387	-		CCNA_02262	0.50	+2.3
2,415,387	-		CCNA_02262	0.50	+0.4
2,415,426	+		CCNA_02262	0.51	+1.3
2,415,426	+		CCNA_02262	0.51	-2.2
2,415,426	+		CCNA_02262	0.51	+0.3
2,415,429	-		CCNA_02262	0.51	-0.1
2,415,434	-		CCNA_02262	0.51	-0.3
2,415,434	-		CCNA_02262	0.51	-0.4
2,415,434	-		CCNA_02262	0.51	+1.1
2,415,434	-		CCNA_02262	0.51	-0.5
2,415,434	-		CCNA_02262	0.51	+0.2
2,415,434	-		CCNA_02262	0.51	-0.2
2,415,434	-		CCNA_02262	0.51	-0.6
2,415,434	-		CCNA_02262	0.51	-0.9
2,415,442	+		CCNA_02262	0.51	+1.3
2,415,450	-		CCNA_02262	0.51	+0.3
2,415,460	-		CCNA_02262	0.51	+1.1
2,415,462	+		CCNA_02262	0.52	-1.3
2,415,479	-		CCNA_02262	0.52	-1.0
2,415,479	-		CCNA_02262	0.52	-0.3
2,415,493	+		CCNA_02262	0.52	-0.6
2,415,503	+		CCNA_02262	0.53	-0.3
2,415,517	+		CCNA_02262	0.53	+1.3
2,415,525	-		CCNA_02262	0.53	+0.5
2,415,531	+		CCNA_02262	0.53	-0.5
2,415,531	+		CCNA_02262	0.53	+1.3
2,415,607	+		CCNA_02262	0.55	+2.3
2,415,631	+		CCNA_02262	0.56	-1.8
2,415,642	+		CCNA_02262	0.56	-0.0
2,415,642	+		CCNA_02262	0.56	-0.7
2,415,642	+		CCNA_02262	0.56	+1.3
2,415,642	+		CCNA_02262	0.56	+3.3
2,415,642	+		CCNA_02262	0.56	+1.1
2,415,650	-		CCNA_02262	0.56	+0.2
2,415,650	-		CCNA_02262	0.56	+1.3
2,415,650	-		CCNA_02262	0.56	+1.3
2,415,650	-		CCNA_02262	0.56	-0.2
2,415,650	-		CCNA_02262	0.56	-0.2
2,415,666	+		CCNA_02262	0.57	+1.3
2,415,674	-		CCNA_02262	0.57	+1.3
2,415,722	+		CCNA_02262	0.58	+0.7
2,415,800	+		CCNA_02262	0.60	+2.3
2,415,811	+		CCNA_02262	0.60	+0.3
2,415,819	-		CCNA_02262	0.61	+1.3
2,415,846	+		CCNA_02262	0.61	+0.9
2,415,847	+		CCNA_02262	0.61	+1.3
2,415,871	+		CCNA_02262	0.62	-1.3
2,415,879	-		CCNA_02262	0.62	+0.3
2,415,932	+		CCNA_02262	0.64	+0.3
2,415,932	+		CCNA_02262	0.64	+3.1
2,415,932	+		CCNA_02262	0.64	-0.1
2,415,940	-		CCNA_02262	0.64	-0.7
2,415,940	-		CCNA_02262	0.64	-0.0
2,415,948	-		CCNA_02262	0.64	+0.3
2,415,951	+		CCNA_02262	0.64	-1.2
2,416,013	-		CCNA_02262	0.66	+0.7
2,416,016	-		CCNA_02262	0.66	+0.5
2,416,016	-		CCNA_02262	0.66	-1.6
2,416,016	-		CCNA_02262	0.66	-0.5
2,416,017	+		CCNA_02262	0.66	-1.3
2,416,023	+		CCNA_02262	0.66	-0.0
2,416,026	-		CCNA_02262	0.66	-1.4
2,416,045	-		CCNA_02262	0.66	-0.2
2,416,051	-		CCNA_02262	0.67	-1.3
2,416,058	+		CCNA_02262	0.67	+0.7
2,416,058	+		CCNA_02262	0.67	+0.7
2,416,066	-		CCNA_02262	0.67	-0.1
2,416,068	+		CCNA_02262	0.67	-0.5
2,416,076	-		CCNA_02262	0.67	+1.7
2,416,078	+		CCNA_02262	0.67	-0.0
2,416,086	-		CCNA_02262	0.67	+0.2
2,416,086	-		CCNA_02262	0.67	-0.6
2,416,120	-		CCNA_02262	0.68	-0.3
2,416,132	-		CCNA_02262	0.69	+1.3
2,416,151	+		CCNA_02262	0.69	-0.2
2,416,207	+		CCNA_02262	0.71	-1.2
2,416,207	+		CCNA_02262	0.71	+1.3
2,416,208	-		CCNA_02262	0.71	-2.1
2,416,215	-		CCNA_02262	0.71	+0.8
2,416,247	-		CCNA_02262	0.72	-0.0
2,416,247	-		CCNA_02262	0.72	-1.2
2,416,247	-		CCNA_02262	0.72	-0.0
2,416,296	+		CCNA_02262	0.73	-1.0
2,416,304	-		CCNA_02262	0.73	-1.2
2,416,306	+		CCNA_02262	0.73	+0.3
2,416,306	+		CCNA_02262	0.73	-0.0
2,416,314	-		CCNA_02262	0.73	-0.3
2,416,314	-		CCNA_02262	0.73	+0.3
2,416,344	+		CCNA_02262	0.74	-0.0
2,416,362	-		CCNA_02262	0.75	-1.0
2,416,459	+		CCNA_02262	0.77	+1.3
2,416,460	+		CCNA_02262	0.77	+2.3
2,416,472	-		CCNA_02262	0.77	+1.7
2,416,494	+		CCNA_02262	0.78	+1.3
2,416,494	+		CCNA_02262	0.78	+0.6
2,416,494	+		CCNA_02262	0.78	-0.3
2,416,502	-		CCNA_02262	0.78	+1.7
2,416,502	-		CCNA_02262	0.78	-0.5
2,416,503	-		CCNA_02262	0.78	-0.7
2,416,530	-		CCNA_02262	0.79	+0.3
2,416,530	-		CCNA_02262	0.79	-0.0
2,416,537	+		CCNA_02262	0.79	+2.3
2,416,537	+		CCNA_02262	0.79	+1.3
2,416,545	-		CCNA_02262	0.79	+0.7
2,416,575	+		CCNA_02262	0.80	+0.7
2,416,583	-		CCNA_02262	0.80	+0.7
2,416,583	-		CCNA_02262	0.80	+2.3
2,416,583	-		CCNA_02262	0.80	+0.2
2,416,583	-		CCNA_02262	0.80	+2.0
2,416,583	-		CCNA_02262	0.80	+2.3
2,416,583	-		CCNA_02262	0.80	-0.0
2,416,608	+		CCNA_02262	0.81	+0.6
2,416,617	+		CCNA_02262	0.81	+0.3
2,416,630	+		CCNA_02262	0.81	+1.3
2,416,635	+		CCNA_02262	0.81	-0.3
2,416,648	+		CCNA_02262	0.82	+1.3
2,416,684	+		CCNA_02262	0.83	-1.0
2,416,684	+		CCNA_02262	0.83	-1.3
2,416,692	-		CCNA_02262	0.83	-0.2
2,416,738	-		CCNA_02262	0.84	+1.3
2,416,745	-		CCNA_02262	0.84	+0.7
2,416,768	+		CCNA_02262	0.85	-1.3
2,416,772	+		CCNA_02262	0.85	+1.3
2,416,776	-		CCNA_02262	0.85	+0.2
2,416,776	-		CCNA_02262	0.85	-0.0
2,416,776	-		CCNA_02262	0.85	+0.3
2,416,776	-		CCNA_02262	0.85	+0.6
2,416,776	-		CCNA_02262	0.85	-0.7
2,416,782	+		CCNA_02262	0.85	-0.0
2,416,819	+		CCNA_02262	0.86	-0.7
2,416,827	-		CCNA_02262	0.86	+0.3
2,416,832	-		CCNA_02262	0.87	+0.1
2,416,899	+		CCNA_02262	0.88	+0.6
2,416,901	-		CCNA_02262	0.88	+0.7
2,416,901	-		CCNA_02262	0.88	+1.3
2,416,909	-		CCNA_02262	0.88	-0.4
2,416,909	-		CCNA_02262	0.88	-2.1
2,416,958	+		CCNA_02262	0.90	+0.7
2,416,970	+				+1.3
2,416,978	-				+1.0
2,417,002	-				-0.9
2,417,018	+				-1.5
2,417,026	-				-0.9
2,417,065	-				-0.9
2,417,070	-				-0.5
2,417,082	-				+0.7
2,417,100	-				+0.2
2,417,126	+				+0.1
2,417,127	-				+0.3
2,417,164	-				+1.2
2,417,185	+				-0.0
2,417,185	+				-0.4
2,417,185	+				-0.3
2,417,186	-				-0.5
2,417,193	-				-2.8
2,417,193	-				-0.5
2,417,193	-				-0.3
2,417,193	-				+0.7
2,417,235	+				+1.2
2,417,235	+				+1.3
2,417,243	-				-0.0
2,417,243	-				+0.1
2,417,243	-				-1.7
2,417,243	-				+0.3
2,417,243	-				-0.3
2,417,288	-				-1.7
2,417,297	+				-0.9
2,417,305	+				-0.9
2,417,317	+				-0.9
2,417,337	-				+0.1
2,417,365	+				-0.5
2,417,365	+				+1.3
2,417,385	+				+0.6
2,417,385	+				+2.3
2,417,385	+				+0.7
2,417,386	+				+0.2
2,417,390	+				-0.8
2,417,393	-				+0.5
2,417,393	-				-1.8
2,417,427	-		CCNA_02263	0.15	+0.3
2,417,448	+		CCNA_02263	0.19	-1.0
2,417,472	-		CCNA_02263	0.24	+0.7
2,417,478	-		CCNA_02263	0.25	-0.5
2,417,532	+		CCNA_02263	0.36	+0.8
2,417,535	-		CCNA_02263	0.37	-0.5
2,417,540	-		CCNA_02263	0.38	-1.6
2,417,540	-		CCNA_02263	0.38	-0.3
2,417,540	-		CCNA_02263	0.38	-1.3
2,417,540	-		CCNA_02263	0.38	-1.0
2,417,555	+		CCNA_02263	0.41	+0.7
2,417,558	-		CCNA_02263	0.41	-1.0
2,417,608	-		CCNA_02263	0.51	-1.0
2,417,631	+		CCNA_02263	0.56	-1.6
2,417,631	+		CCNA_02263	0.56	-0.0
2,417,634	-		CCNA_02263	0.57	-0.4
2,417,639	-		CCNA_02263	0.58	-1.3
2,417,639	-		CCNA_02263	0.58	+1.3
2,417,669	-		CCNA_02263	0.64	+0.2
2,417,799	+				-0.1
2,417,799	+				-0.9
2,417,807	-				-0.5
2,417,807	-				-1.2
2,417,807	-				-1.0
2,417,807	-				+0.5
2,417,809	+				-1.3
2,417,809	+				-1.0
2,417,809	+				-0.1
2,417,817	-				-1.2
2,417,868	+				-1.3
2,417,868	+				-0.6
2,417,868	+				+0.7
2,417,869	-				-1.3
2,417,876	-				-0.8
2,417,876	-				+0.4
2,417,877	+				-0.9
2,417,887	+				+0.3
2,417,905	-				+0.6
2,417,988	-				+2.3
2,418,053	+				+0.1
2,418,061	-				-0.6
2,418,140	+		CCNA_02264	0.20	-1.4
2,418,140	-		CCNA_02264	0.20	-0.2
2,418,182	+		CCNA_02264	0.27	-1.2
2,418,189	-		CCNA_02264	0.28	-0.7
2,418,205	+		CCNA_02264	0.31	-0.5
2,418,255	-		CCNA_02264	0.40	-0.5
2,418,290	-		CCNA_02264	0.46	+2.3
2,418,317	-		CCNA_02264	0.51	+0.1
2,418,320	+		CCNA_02264	0.51	-1.3
2,418,322	-		CCNA_02264	0.52	-1.2
2,418,325	+		CCNA_02264	0.52	-0.9
2,418,338	-		CCNA_02264	0.54	+0.4
2,418,352	+		CCNA_02264	0.57	-0.5