Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19590

Experiment: Glucuronamide (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19585 and BWI76_RS19590 are separated by 11 nucleotidesBWI76_RS19590 and BWI76_RS19595 are separated by 126 nucleotides BWI76_RS19585: BWI76_RS19585 - gentisate 1,2-dioxygenase, at 4,094,371 to 4,095,408 _RS19585 BWI76_RS19590: BWI76_RS19590 - MFS transporter, at 4,095,420 to 4,096,778 _RS19590 BWI76_RS19595: BWI76_RS19595 - hypothetical protein, at 4,096,905 to 4,097,822 _RS19595 Position (kb) 4095 4096 4097Strain fitness (log2 ratio) -2 -1 0 1 2at 4094.553 kb on - strand, within BWI76_RS19585at 4094.733 kb on - strand, within BWI76_RS19585at 4094.905 kb on - strand, within BWI76_RS19585at 4095.479 kb on + strandat 4095.500 kb on + strandat 4095.641 kb on - strand, within BWI76_RS19590at 4095.812 kb on - strand, within BWI76_RS19590at 4096.395 kb on - strand, within BWI76_RS19590at 4096.409 kb on + strand, within BWI76_RS19590at 4096.417 kb on - strand, within BWI76_RS19590at 4096.804 kb on - strandat 4097.321 kb on + strand, within BWI76_RS19595at 4097.414 kb on - strand, within BWI76_RS19595at 4097.477 kb on - strand, within BWI76_RS19595at 4097.555 kb on + strand, within BWI76_RS19595at 4097.672 kb on + strand, within BWI76_RS19595at 4097.672 kb on + strand, within BWI76_RS19595at 4097.672 kb on + strand, within BWI76_RS19595at 4097.672 kb on + strand, within BWI76_RS19595at 4097.680 kb on - strand, within BWI76_RS19595at 4097.690 kb on - strand, within BWI76_RS19595at 4097.726 kb on + strand, within BWI76_RS19595at 4097.770 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glucuronamide (N)
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4,094,553 - BWI76_RS19585 0.18 +0.2
4,094,733 - BWI76_RS19585 0.35 +0.1
4,094,905 - BWI76_RS19585 0.51 -1.5
4,095,479 + +0.1
4,095,500 + -2.5
4,095,641 - BWI76_RS19590 0.16 -1.5
4,095,812 - BWI76_RS19590 0.29 +2.3
4,096,395 - BWI76_RS19590 0.72 +0.3
4,096,409 + BWI76_RS19590 0.73 +1.1
4,096,417 - BWI76_RS19590 0.73 -0.6
4,096,804 - -0.2
4,097,321 + BWI76_RS19595 0.45 -0.1
4,097,414 - BWI76_RS19595 0.55 -1.4
4,097,477 - BWI76_RS19595 0.62 +0.6
4,097,555 + BWI76_RS19595 0.71 +0.4
4,097,672 + BWI76_RS19595 0.84 +0.4
4,097,672 + BWI76_RS19595 0.84 -0.2
4,097,672 + BWI76_RS19595 0.84 -0.0
4,097,672 + BWI76_RS19595 0.84 -1.6
4,097,680 - BWI76_RS19595 0.84 +0.2
4,097,690 - BWI76_RS19595 0.86 -0.7
4,097,726 + BWI76_RS19595 0.89 +2.1
4,097,770 + +0.2

Or see this region's nucleotide sequence