Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14870

Experiment: Glucuronamide (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14865 and BWI76_RS14870 are separated by 77 nucleotidesBWI76_RS14870 and BWI76_RS14875 overlap by 1 nucleotides BWI76_RS14865: BWI76_RS14865 - ribose ABC transporter permease, at 3,114,241 to 3,115,260 _RS14865 BWI76_RS14870: BWI76_RS14870 - hypothetical protein, at 3,115,338 to 3,116,705 _RS14870 BWI76_RS14875: BWI76_RS14875 - ribokinase-like domain-containing protein, at 3,116,705 to 3,117,649 _RS14875 Position (kb) 3115 3116 3117Strain fitness (log2 ratio) -3 -2 -1 0 1at 3114.353 kb on + strand, within BWI76_RS14865at 3114.684 kb on - strand, within BWI76_RS14865at 3114.741 kb on + strand, within BWI76_RS14865at 3115.035 kb on - strand, within BWI76_RS14865at 3115.348 kb on + strandat 3115.473 kb on - strandat 3115.540 kb on + strand, within BWI76_RS14870at 3116.071 kb on - strand, within BWI76_RS14870at 3117.068 kb on + strand, within BWI76_RS14875at 3117.093 kb on - strand, within BWI76_RS14875at 3117.485 kb on - strand, within BWI76_RS14875at 3117.487 kb on + strand, within BWI76_RS14875at 3117.583 kb on + strandat 3117.599 kb on + strandat 3117.636 kb on + strandat 3117.644 kb on - strandat 3117.644 kb on - strandat 3117.681 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glucuronamide (N)
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3,114,353 + BWI76_RS14865 0.11 -0.5
3,114,684 - BWI76_RS14865 0.43 +0.6
3,114,741 + BWI76_RS14865 0.49 -0.9
3,115,035 - BWI76_RS14865 0.78 -0.4
3,115,348 + -0.1
3,115,473 - -0.2
3,115,540 + BWI76_RS14870 0.15 -2.9
3,116,071 - BWI76_RS14870 0.54 -1.1
3,117,068 + BWI76_RS14875 0.38 +0.7
3,117,093 - BWI76_RS14875 0.41 -0.5
3,117,485 - BWI76_RS14875 0.83 -0.5
3,117,487 + BWI76_RS14875 0.83 -0.3
3,117,583 + +0.6
3,117,599 + -0.3
3,117,636 + +0.4
3,117,644 - +1.4
3,117,644 - -0.4
3,117,681 - -1.7

Or see this region's nucleotide sequence