Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03125 and BWI76_RS03130 are separated by 10 nucleotides BWI76_RS03130 and BWI76_RS03135 overlap by 11 nucleotides BWI76_RS03135 and BWI76_RS03140 are separated by 190 nucleotides
BWI76_RS03125: BWI76_RS03125 - phosphodiesterase, at 644,398 to 645,222
_RS03125
BWI76_RS03130: BWI76_RS03130 - putative SN-glycerol-3-phosphate transport system permease, at 645,233 to 646,120
_RS03130
BWI76_RS03135: BWI76_RS03135 - sugar ABC transporter permease, at 646,110 to 646,982
_RS03135
BWI76_RS03140: BWI76_RS03140 - alcohol dehydrogenase, at 647,173 to 648,192
_RS03140
Position (kb) 646
647 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 645.462 kb on - strand, within BWI76_RS03130 at 645.476 kb on + strand, within BWI76_RS03130 at 645.484 kb on - strand, within BWI76_RS03130 at 645.484 kb on - strand, within BWI76_RS03130 at 645.523 kb on - strand, within BWI76_RS03130 at 645.634 kb on + strand, within BWI76_RS03130 at 645.801 kb on + strand, within BWI76_RS03130 at 645.984 kb on + strand, within BWI76_RS03130 at 646.016 kb on + strand, within BWI76_RS03130 at 646.024 kb on - strand, within BWI76_RS03130 at 646.254 kb on - strand, within BWI76_RS03135 at 646.254 kb on - strand, within BWI76_RS03135 at 646.321 kb on + strand, within BWI76_RS03135 at 646.421 kb on + strand, within BWI76_RS03135 at 646.524 kb on - strand, within BWI76_RS03135 at 646.541 kb on + strand, within BWI76_RS03135 at 646.598 kb on + strand, within BWI76_RS03135 at 646.606 kb on - strand, within BWI76_RS03135 at 646.606 kb on - strand, within BWI76_RS03135 at 646.606 kb on - strand, within BWI76_RS03135 at 646.639 kb on + strand, within BWI76_RS03135 at 646.647 kb on + strand, within BWI76_RS03135 at 646.768 kb on + strand, within BWI76_RS03135 at 646.768 kb on + strand, within BWI76_RS03135 at 646.881 kb on - strand, within BWI76_RS03135 at 646.887 kb on + strand, within BWI76_RS03135 at 647.206 kb on + strand at 647.260 kb on - strand at 647.274 kb on + strand at 647.378 kb on - strand, within BWI76_RS03140 at 647.610 kb on + strand, within BWI76_RS03140 at 647.632 kb on - strand, within BWI76_RS03140 at 647.891 kb on + strand, within BWI76_RS03140 at 647.899 kb on - strand, within BWI76_RS03140 at 647.945 kb on + strand, within BWI76_RS03140 at 647.954 kb on + strand, within BWI76_RS03140 at 647.954 kb on + strand, within BWI76_RS03140
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 645,462 - BWI76_RS03130 0.26 -1.7 645,476 + BWI76_RS03130 0.27 +1.8 645,484 - BWI76_RS03130 0.28 +1.3 645,484 - BWI76_RS03130 0.28 -0.1 645,523 - BWI76_RS03130 0.33 -0.1 645,634 + BWI76_RS03130 0.45 +0.6 645,801 + BWI76_RS03130 0.64 +0.2 645,984 + BWI76_RS03130 0.85 +1.0 646,016 + BWI76_RS03130 0.88 +1.0 646,024 - BWI76_RS03130 0.89 -1.0 646,254 - BWI76_RS03135 0.16 +1.5 646,254 - BWI76_RS03135 0.16 +1.5 646,321 + BWI76_RS03135 0.24 +1.1 646,421 + BWI76_RS03135 0.36 -0.4 646,524 - BWI76_RS03135 0.47 +1.2 646,541 + BWI76_RS03135 0.49 -1.4 646,598 + BWI76_RS03135 0.56 +1.7 646,606 - BWI76_RS03135 0.57 +0.1 646,606 - BWI76_RS03135 0.57 +1.3 646,606 - BWI76_RS03135 0.57 +0.6 646,639 + BWI76_RS03135 0.61 -0.6 646,647 + BWI76_RS03135 0.62 -0.4 646,768 + BWI76_RS03135 0.75 -0.8 646,768 + BWI76_RS03135 0.75 +0.0 646,881 - BWI76_RS03135 0.88 -0.5 646,887 + BWI76_RS03135 0.89 +0.6 647,206 + +0.3 647,260 - +0.3 647,274 + +1.4 647,378 - BWI76_RS03140 0.20 -0.1 647,610 + BWI76_RS03140 0.43 -2.1 647,632 - BWI76_RS03140 0.45 -0.2 647,891 + BWI76_RS03140 0.70 +0.4 647,899 - BWI76_RS03140 0.71 -3.0 647,945 + BWI76_RS03140 0.76 +0.2 647,954 + BWI76_RS03140 0.77 -2.4 647,954 + BWI76_RS03140 0.77 -0.4
Or see this region's nucleotide sequence