Experiment: 1 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1655 and DvMF_1656 are separated by 12 nucleotides DvMF_1656 and DvMF_1657 overlap by 14 nucleotides
DvMF_1655: DvMF_1655 - phage major capsid protein, HK97 family (RefSeq), at 2,031,821 to 2,033,041
_1655
DvMF_1656: DvMF_1656 - phage prohead protease, HK97 family (RefSeq), at 2,033,054 to 2,033,755
_1656
DvMF_1657: DvMF_1657 - phage portal protein, HK97 family (RefSeq), at 2,033,742 to 2,034,968
_1657
Position (kb)
2033
2034 Strain fitness (log2 ratio)
-1
0
1 at 2032.079 kb on - strand, within DvMF_1655 at 2032.483 kb on - strand, within DvMF_1655 at 2032.613 kb on + strand, within DvMF_1655 at 2032.794 kb on + strand, within DvMF_1655 at 2032.802 kb on - strand, within DvMF_1655 at 2032.853 kb on - strand, within DvMF_1655 at 2032.854 kb on + strand, within DvMF_1655 at 2032.868 kb on + strand, within DvMF_1655 at 2032.946 kb on - strand at 2033.045 kb on - strand at 2033.045 kb on - strand at 2033.241 kb on + strand, within DvMF_1656 at 2033.586 kb on + strand, within DvMF_1656 at 2033.586 kb on + strand, within DvMF_1656 at 2033.645 kb on - strand, within DvMF_1656 at 2033.734 kb on + strand at 2033.977 kb on - strand, within DvMF_1657 at 2034.028 kb on + strand, within DvMF_1657 at 2034.043 kb on - strand, within DvMF_1657 at 2034.043 kb on - strand, within DvMF_1657 at 2034.049 kb on - strand, within DvMF_1657 at 2034.088 kb on + strand, within DvMF_1657 at 2034.168 kb on + strand, within DvMF_1657 at 2034.452 kb on - strand, within DvMF_1657 at 2034.480 kb on - strand, within DvMF_1657 at 2034.600 kb on + strand, within DvMF_1657 at 2034.692 kb on + strand, within DvMF_1657
Per-strain Table
Position Strand Gene LocusTag Fraction 1 day starvation, 30C remove 2,032,079 - DvMF_1655 0.21 +0.1 2,032,483 - DvMF_1655 0.54 +0.4 2,032,613 + DvMF_1655 0.65 +0.6 2,032,794 + DvMF_1655 0.80 +1.0 2,032,802 - DvMF_1655 0.80 +0.7 2,032,853 - DvMF_1655 0.85 +0.1 2,032,854 + DvMF_1655 0.85 +0.6 2,032,868 + DvMF_1655 0.86 +1.0 2,032,946 - +0.4 2,033,045 - +0.1 2,033,045 - -0.6 2,033,241 + DvMF_1656 0.27 +1.1 2,033,586 + DvMF_1656 0.76 +1.4 2,033,586 + DvMF_1656 0.76 +1.2 2,033,645 - DvMF_1656 0.84 +0.9 2,033,734 + -1.2 2,033,977 - DvMF_1657 0.19 -0.2 2,034,028 + DvMF_1657 0.23 +0.9 2,034,043 - DvMF_1657 0.25 +0.2 2,034,043 - DvMF_1657 0.25 +0.3 2,034,049 - DvMF_1657 0.25 +1.3 2,034,088 + DvMF_1657 0.28 +0.8 2,034,168 + DvMF_1657 0.35 +0.6 2,034,452 - DvMF_1657 0.58 +0.3 2,034,480 - DvMF_1657 0.60 +0.3 2,034,600 + DvMF_1657 0.70 +1.0 2,034,692 + DvMF_1657 0.77 +0.2
Or see this region's nucleotide sequence