Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2899

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
3,054,649	-		Dshi_2898	0.45	-0.4
3,054,652	+		Dshi_2898	0.45	+0.2
3,054,660	-		Dshi_2898	0.45	-0.7
3,054,758	-		Dshi_2898	0.52	-0.1
3,054,824	+		Dshi_2898	0.57	+0.2
3,054,824	+		Dshi_2898	0.57	-0.5
3,054,832	-		Dshi_2898	0.58	-0.5
3,054,837	-		Dshi_2898	0.58	-0.2
3,054,837	-		Dshi_2898	0.58	-0.6
3,054,839	+		Dshi_2898	0.58	+0.6
3,054,879	-		Dshi_2898	0.61	+0.1
3,055,023	-		Dshi_2898	0.71	-0.6
3,055,052	+		Dshi_2898	0.73	+0.1
3,055,113	+		Dshi_2898	0.78	-0.1
3,055,123	+		Dshi_2898	0.78	-0.4
3,055,131	-		Dshi_2898	0.79	+0.1
3,055,174	-		Dshi_2898	0.82	+0.2
3,055,247	+		Dshi_2898	0.87	+0.7
3,055,285	+				+0.7
3,055,459	+				-0.1
3,055,467	-				-0.9
3,055,669	-		Dshi_2899	0.51	-0.7
3,055,709	+		Dshi_2899	0.62	-0.5
3,055,725	-		Dshi_2899	0.67	-0.1
3,055,733	-		Dshi_2899	0.69	-1.5
3,055,847	+				+0.0
3,055,854	-				+0.3
3,055,923	+		Dshi_2900	0.47	-0.4
3,055,945	-		Dshi_2900	0.61	-0.3
3,055,985	-		Dshi_2900	0.87	-0.9
3,055,985	-		Dshi_2900	0.87	-0.1
3,055,990	-				-0.3
3,056,062	+				-1.1
3,056,094	+				+0.5
3,056,118	+				+0.4
3,056,173	+				+0.4
3,056,182	-				-0.0
3,056,264	-				+0.4
3,056,339	+				-0.6
3,056,339	+				+1.3
3,056,348	+				+0.3
3,056,349	+				+0.4
3,056,355	+				+0.0
3,056,355	+				-0.4
3,056,355	+				-0.6
3,056,361	-				-0.3
3,056,363	-				-1.7
3,056,366	+				-0.9
3,056,371	+				-0.4
3,056,411	-				+0.1
3,056,454	-				-0.2
3,056,502	-				-0.8
3,056,511	+				-1.2
3,056,512	+				+1.1
3,056,519	-				-0.4
3,056,520	-				+0.1
3,056,520	-				-0.7
3,056,536	-				-0.6
3,056,539	-				+0.1
3,056,541	-				+1.2
3,056,603	-				-1.1
3,056,652	-		Dshi_2901	0.11	-0.6
3,056,652	-		Dshi_2901	0.11	-0.1
3,056,652	-		Dshi_2901	0.11	-0.9
3,056,652	-		Dshi_2901	0.11	+0.3
3,056,674	-		Dshi_2901	0.12	-0.1
3,056,674	-		Dshi_2901	0.12	-0.3
3,056,698	+		Dshi_2901	0.14	+0.3
3,056,706	-		Dshi_2901	0.14	+1.1
3,056,727	-		Dshi_2901	0.15	+0.1
3,056,767	+		Dshi_2901	0.17	-0.5
3,056,823	-		Dshi_2901	0.19	-0.5