Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2543

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
2,698,508	+				+1.7
2,698,516	+				+0.4
2,698,558	-				-0.1
2,698,584	+				-0.7
2,698,584	+				-0.1
2,698,597	-				-0.2
2,698,643	-		Dshi_2542	0.13	+0.3
2,698,674	+		Dshi_2542	0.17	-0.8
2,698,774	-		Dshi_2542	0.28	-0.2
2,698,809	+		Dshi_2542	0.31	+2.0
2,698,809	+		Dshi_2542	0.31	-0.1
2,698,809	+		Dshi_2542	0.31	-0.9
2,698,809	+		Dshi_2542	0.31	-0.6
2,698,809	+				+1.6
2,698,817	-		Dshi_2542	0.32	+0.3
2,698,829	-		Dshi_2542	0.34	-0.7
2,698,855	-		Dshi_2542	0.36	-0.0
2,698,932	+		Dshi_2542	0.45	+0.0
2,698,980	-		Dshi_2542	0.50	-1.2
2,699,004	-		Dshi_2542	0.52	-0.1
2,699,014	+		Dshi_2542	0.54	+0.3
2,699,045	+		Dshi_2542	0.57	-1.3
2,699,088	-		Dshi_2542	0.61	-0.3
2,699,131	+		Dshi_2542	0.66	-0.4
2,699,131	+		Dshi_2542	0.66	-0.4
2,699,131	+		Dshi_2542	0.66	-0.6
2,699,131	+		Dshi_2542	0.66	-0.6
2,699,139	-		Dshi_2542	0.67	+0.0
2,699,139	-		Dshi_2542	0.67	+0.0
2,699,139	-		Dshi_2542	0.67	-0.1
2,699,290	-		Dshi_2542	0.83	-1.2
2,699,296	+		Dshi_2542	0.84	+0.0
2,699,369	+				-1.1
2,699,369	+				-1.0
2,699,418	+				+0.8
2,699,418	+				+0.1
2,699,447	-				+0.8
2,699,502	+				+0.0
2,699,510	-				-0.2
2,699,618	+		Dshi_2543	0.14	-0.4
2,699,618	+		Dshi_2543	0.14	+0.0
2,699,618	+		Dshi_2543	0.14	-1.3
2,699,626	-		Dshi_2543	0.14	+0.8
2,699,626	-		Dshi_2543	0.14	+0.6
2,699,633	+		Dshi_2543	0.15	+0.3
2,699,659	+		Dshi_2543	0.17	+0.1
2,699,688	+		Dshi_2543	0.20	-0.2
2,699,820	+		Dshi_2543	0.33	-0.2
2,699,874	+		Dshi_2543	0.38	+1.4
2,699,974	+		Dshi_2543	0.47	-0.0
2,700,142	+		Dshi_2543	0.63	-1.8
2,700,209	+		Dshi_2543	0.69	-1.0
2,700,216	+		Dshi_2543	0.70	-0.3
2,700,216	+		Dshi_2543	0.70	+0.5
2,700,240	+		Dshi_2543	0.72	+1.0
2,700,248	-		Dshi_2543	0.73	+0.1
2,700,321	-		Dshi_2543	0.80	+1.0
2,700,328	-		Dshi_2543	0.81	-0.3
2,700,344	+		Dshi_2543	0.82	+0.1
2,700,344	+		Dshi_2543	0.82	+0.2
2,700,362	-		Dshi_2543	0.84	-0.9
2,700,398	-		Dshi_2543	0.87	-0.5
2,700,398	-		Dshi_2543	0.87	-1.8
2,700,409	-		Dshi_2543	0.88	-0.2
2,700,413	+		Dshi_2543	0.89	-0.4
2,700,448	-				+0.1
2,700,463	+				+0.3
2,700,473	-				-0.1
2,700,605	+				-0.4
2,700,651	+		Dshi_2544	0.15	-0.5
2,700,661	+		Dshi_2544	0.16	+0.3
2,700,661	+		Dshi_2544	0.16	-1.0
2,700,679	-		Dshi_2544	0.18	+0.0
2,700,680	-		Dshi_2544	0.18	-0.6
2,700,743	-		Dshi_2544	0.26	-2.2
2,700,743	-		Dshi_2544	0.26	+0.9
2,700,747	+		Dshi_2544	0.26	+0.5
2,700,748	-		Dshi_2544	0.27	-1.8
2,700,755	-		Dshi_2544	0.27	-1.4
2,700,852	-		Dshi_2544	0.39	+0.2
2,700,921	+		Dshi_2544	0.48	-0.4
2,700,929	-		Dshi_2544	0.49	-0.2
2,700,929	-		Dshi_2544	0.49	-0.5
2,700,964	+		Dshi_2544	0.53	+0.2
2,700,964	+		Dshi_2544	0.53	-0.2
2,700,972	-		Dshi_2544	0.54	-1.2
2,701,004	+		Dshi_2544	0.58	-0.8
2,701,022	-		Dshi_2544	0.60	+0.1
2,701,098	-		Dshi_2544	0.70	+0.2
2,701,124	+		Dshi_2544	0.73	-0.1
2,701,170	+		Dshi_2544	0.79	-1.6
2,701,174	+		Dshi_2544	0.79	-0.6
2,701,178	-		Dshi_2544	0.80	+0.2
2,701,206	-		Dshi_2544	0.83	-1.7
2,701,241	+		Dshi_2544	0.87	+0.0
2,701,241	+		Dshi_2544	0.87	+1.3
2,701,249	-		Dshi_2544	0.88	-1.1
2,701,328	+				+1.0
2,701,336	+				+0.2
2,701,361	+				-0.4
2,701,402	+				+0.0
2,701,433	+		Dshi_2545	0.11	-0.1