Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2127

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
2,257,195	+		Dshi_2126	0.38	-0.0
2,257,290	-		Dshi_2126	0.46	-1.1
2,257,297	+		Dshi_2126	0.46	-0.1
2,257,304	-		Dshi_2126	0.47	-0.9
2,257,304	-		Dshi_2126	0.47	-0.2
2,257,378	-		Dshi_2126	0.53	-1.7
2,257,387	-		Dshi_2126	0.54	-1.0
2,257,462	-		Dshi_2126	0.60	+0.9
2,257,485	+		Dshi_2126	0.61	-0.1
2,257,485	-		Dshi_2126	0.61	+0.4
2,257,535	-		Dshi_2126	0.66	-0.7
2,257,594	+		Dshi_2126	0.70	-0.0
2,257,594	+		Dshi_2126	0.70	-1.1
2,257,609	-		Dshi_2126	0.72	+0.4
2,257,635	+		Dshi_2126	0.74	-1.3
2,257,726	-		Dshi_2126	0.81	+0.5
2,257,726	-		Dshi_2126	0.81	-0.1
2,257,810	-		Dshi_2126	0.88	-0.7
2,257,911	-				-1.5
2,257,923	-				+0.5
2,257,956	-				-0.5
2,257,990	-				-0.7
2,257,990	-				-0.9
2,257,990	-				-1.1
2,257,991	+				-0.2
2,257,992	-				-0.1
2,258,001	+				+0.1
2,258,008	-				-0.3
2,258,015	-				-0.0
2,258,082	+				-0.2
2,258,084	+				-0.5
2,258,103	-				-0.3
2,258,178	+				+1.9
2,258,180	+				-0.5
2,258,196	-				-0.1
2,258,199	+				-0.8
2,258,212	+				-1.0
2,258,217	+				-0.6
2,258,277	-		Dshi_2127	0.18	-0.4
2,258,277	-		Dshi_2127	0.18	-0.3
2,258,288	+		Dshi_2127	0.19	-1.3
2,258,346	-		Dshi_2127	0.29	-0.3
2,258,352	+		Dshi_2127	0.30	+0.5
2,258,352	+		Dshi_2127	0.30	+2.5
2,258,360	-		Dshi_2127	0.31	+0.6
2,258,461	-		Dshi_2127	0.47	-0.5
2,258,463	-		Dshi_2127	0.48	-0.2
2,258,472	+		Dshi_2127	0.49	-0.3
2,258,482	+		Dshi_2127	0.51	+1.7
2,258,516	+		Dshi_2127	0.56	+0.6
2,258,524	-		Dshi_2127	0.57	+0.8
2,258,524	-		Dshi_2127	0.57	-0.1
2,258,559	+		Dshi_2127	0.63	+0.1
2,258,589	+		Dshi_2127	0.68	-0.5
2,258,594	+		Dshi_2127	0.69	+0.7
2,258,629	-		Dshi_2127	0.74	+0.0
2,258,803	-				+0.2
2,258,803	-				-0.6
2,258,979	+				-1.0
2,258,992	-				+0.0
2,259,028	+		Dshi_2128	0.11	-0.1
2,259,145	+		Dshi_2128	0.35	-0.4
2,259,182	+		Dshi_2128	0.43	-1.3
2,259,182	+		Dshi_2128	0.43	-1.1
2,259,253	+		Dshi_2128	0.57	-0.2
2,259,339	+		Dshi_2128	0.75	+0.5
2,259,357	-		Dshi_2128	0.79	-0.7
2,259,428	-				-0.5
2,259,443	+				+0.5
2,259,466	+				+0.4
2,259,518	+				-0.4
2,259,566	-				-0.6
2,259,600	+				-0.9
2,259,606	+				-0.1
2,259,672	+		Dshi_2129	0.13	-0.0