Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1727
Experiment: m.b. Doxycycline hyclate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Doxycycline hyclate 0.004 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,792,647 | - | -1.2 | |||
| 1,792,805 | + | Dshi_1726 | 0.24 | -0.3 | |
| 1,792,933 | + | Dshi_1726 | 0.37 | -0.1 | |
| 1,793,122 | - | Dshi_1726 | 0.56 | -0.0 | |
| 1,793,505 | + | -0.4 | |||
| 1,793,587 | - | -0.0 | |||
| 1,793,931 | - | Dshi_1727 | 0.38 | -0.4 | |
| 1,793,966 | + | Dshi_1727 | 0.42 | -0.7 | |
| 1,794,063 | + | Dshi_1727 | 0.52 | -0.4 |
Or see this region's nucleotide sequence